Cytobacillus firmus: NAF01_19530
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Entry
NAF01_19530 CDS
T08260
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00860
Porphyrin metabolism
cfir01100
Metabolic pathways
cfir01110
Biosynthesis of secondary metabolites
cfir01120
Microbial metabolism in diverse environments
cfir01240
Biosynthesis of cofactors
Module
cfir_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
cfir_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NAF01_19530 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfir04147
]
NAF01_19530 (hemB)
Enzymes [BR:
cfir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
NAF01_19530 (hemB)
Exosome [BR:
cfir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
NAF01_19530 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF4038
Motif
Other DBs
NCBI-ProteinID:
URT69974
LinkDB
All DBs
Position
complement(3850193..3851173)
Genome browser
AA seq
326 aa
AA seq
DB search
MDLQFNRHRRLRKSPNMRALIRENFLRTEDLIYPIFVAEGEGIKREIPSMPGIFNLSLDH
LEEEMNEVVSLGIKSVLLFGIPKEKDACGQQAYHDHGIVQEATRFIKAKFPEIIIIADTC
LCEYTDHGHCGLIENGEVLNDASLELLVQTAVSQAKAGADIIAPSNMMDGFTAAIRAGLD
EAGFEDIPVMSYAVKYASAFYGPFRDAADSTPQFGDRKAYQMDPANRMEAMREAESDLME
GADFLIVKPGMPYLDIVRDVKNNINLPIVIYNVSGEYSMVKAAAQNGWIDEQRIVMEMLT
GMKRAGSDLIITYHAKDAARWIKEQG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcaatttaacaggcatagacgccttcgtaaaagtccgaatatgagagcgctt
attcgtgaaaacttcttgcgtactgaggatttaatttatccgatttttgtggcagaagga
gaaggcattaaaagagaaataccttcaatgccgggcatcttcaacttatcgctggatcat
cttgaagaggaaatgaacgaagtcgtttctcttggaataaaatcagttctcttatttgga
attcctaaagagaaagatgcatgtggacagcaggcttatcatgatcatggaatcgtacag
gaagctacaagatttattaaagctaaatttccggaaatcatcattatcgctgatacttgc
ctttgcgagtataccgaccatggccactgcggtttaattgaaaatggggaagtgctgaat
gatgcatctctggaactgcttgtgcagacggctgtaagccaggctaaagcaggagcagac
attattgccccatcaaatatgatggatgggtttacagcagccatccgggcaggtcttgat
gaagccggatttgaagatatccctgttatgtcttatgcagttaaatatgcatctgcattc
tatggtcctttccgagatgcagctgacagcacaccgcaatttggcgaccgtaaagcatat
cagatggatcctgccaaccgcatggaagccatgcgcgaagctgaatctgatttaatggaa
ggggcagacttcctgatagttaagccgggaatgccatatttggacattgtacgggacgtt
aagaacaacatcaatctgccaattgtgatttataatgtgagcggtgaatattcaatggtt
aaagctgcggcacaaaacggctggatcgatgaacagagaatagttatggaaatgcttaca
ggcatgaagcgtgcaggaagtgatttaattattacttaccatgcaaaagatgcggcaagg
tggattaaggaacaaggctaa
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