Cytobacillus firmus: NAF01_19755
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Entry
NAF01_19755 CDS
T08260
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
cfir
Cytobacillus firmus
Pathway
cfir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NAF01_19755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_19755
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NAF01_19755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
Apolipoprotein
DUF4298
Spectrin_5
ATG17_like
MAP3K_TRAF_bd
Motif
Other DBs
NCBI-ProteinID:
URT70017
LinkDB
All DBs
Position
complement(3900465..3902822)
Genome browser
AA seq
785 aa
AA seq
DB search
MQERVLKILEFNKVKEQLLEHVSSSLGRKKALNILPSTDYEEVIRRQEETDEAVTVLRIK
GNVPLGGIFDIRPHVKRAVIGGMLSPQELNQISSTIHASRQMKRFIEEFAEEESSLPILL
GYTDKIIVLADLETSIRNAVDDNGEVLDSASETLRSLRNQLRTKESRVRERLESMIRSSS
AQKMLSDAIITIRNDRFVIPVKQEYRGHYGGIIHDQSSSGQTLFIEPASIVQLNNELQGI
RVKEQQEIERILIALSGQTAENSSELETIVDVLGEVDFTFAKARYSKRIKASKPKINNQG
KISLFKARHPLIPIDEVVANDIKLGDDYSTIVITGPNTGGKTVTLKTVGLCTLMAQAGLQ
IPALDGSETAVFGNVYADIGDEQSIEQSLSTFSSHMVNIVDILNQVDFNSLVLFDELGAG
TDPQEGAALAISILDEVYKRGARVIATTHYPELKAYGYNREGVINASVEFDIETLSPTYK
LLIGVPGRSNAFEISKRLGLNDQVIETARSYIGTDTNQVENMIASLEESRRQAEADMEEA
NDFLKSAEKLHKDLQKQMAEFYEQKDAMHEKAAEKAGDIVEKAKAEAEEIIRDLRKMRME
KHAEVKEHELIEAKKRLSDAAPQMSTAKNKLKPKNTKHVFEAGDEVKVLSFGQKGHLLEK
VSENEWQVQIGILKMKVAEKDLEYIKSPKPVETKPVATVKGRDFHVSLELDLRGERYENA
LLRVEKYLDDALLAGYPRVSIIHGKGTGALRQGVQEYLRNHRSVKKIRFGEAGEGGTGVT
IVEFK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagagtattgaagatacttgagttcaataaagtgaaggaacagctgctggaa
catgtttcttcatccttgggaagaaaaaaggccttaaatattcttccttcaactgactat
gaagaagtaatccgcaggcaggaagaaacagatgaagctgtaacagtgcttagaattaaa
gggaatgtacctcttggcggcatttttgatatccgtcctcatgtgaagcgggcggttatt
ggcggaatgcttagtccccaggaacttaaccagatatccagcacgattcatgcaagcagg
cagatgaaacgatttatcgaggaatttgccgaggaagaaagcagtctgccgatcctgttg
ggctatacagataaaattattgttctggccgatttggaaacatctatccgcaatgcggtc
gatgacaatggggaagttcttgacagtgcgagcgagactctccgttcccttcgaaatcag
cttcgtacaaaagaatcccgtgtaagggagcggctggagagcatgattcggtcttccagc
gcacaaaaaatgctttccgatgcgattataaccatccgaaatgaccggtttgtcataccg
gttaagcaggaataccggggccattatggaggcataatccatgaccaaagttcatccggc
cagacattattcattgagcccgcgtccattgttcagctgaacaatgaattacagggcatc
agggtaaaagaacagcaggagattgaacggatacttatagcgctatcaggacagacagct
gagaatagcagtgaactggaaaccattgtagatgtgctcggagaagtcgattttacgttt
gcgaaagccagatacagtaaacgcataaaagcctccaagccaaaaattaataatcaaggg
aaaatttcattattcaaagcccggcatccgcttattccaattgatgaagtggtggcaaat
gatataaagctgggagatgattattcaaccatagtcataacgggacctaataccggcggt
aagacagttaccttaaaaacagtagggctttgcacattgatggcacaggccggtctgcaa
attccggcgcttgatggttctgaaacggctgtcttcggcaatgtttatgctgatatcgga
gatgaacagtcaattgaacaaagcttaagtaccttttcttctcatatggttaatatcgtg
gatattcttaaccaggttgatttcaatagtctggttttattcgatgagctcggtgcaggc
acagacccgcaggaaggtgcagctctcgcgatttccattctcgatgaagtatataagcgg
ggtgcaagagttattgccacaactcattaccctgaactgaaagcctatggctacaacaga
gaaggagttatcaatgccagtgtagaatttgatattgaaacgctaagcccaacctataag
ctgctgattggggttccgggccgaagcaatgcttttgaaatatccaaacggcttgggctc
aatgatcaagtgattgagacagcacgatcctatatcggaacagatacaaatcaggttgag
aatatgattgcttcactggaggaaagccgcagacaggcagaggctgatatggaagaagcc
aatgactttttaaaaagcgctgaaaaactccataaagatctgcaaaagcaaatggctgaa
ttttatgagcaaaaagatgctatgcatgagaaggctgcagagaaagctggagatatcgtt
gagaaagccaaggctgaagcagaagagattatccgtgacttaagaaagatgcggatggag
aaacatgctgaagtgaaggaacacgagctaattgaagcaaagaaacgcctctcagatgct
gcaccccagatgagcacagccaaaaataaattaaagcccaagaatactaagcacgttttt
gaagcaggagatgaagttaaagttctgagttttgggcaaaaaggacatttgcttgaaaag
gtgtctgagaacgaatggcaggttcagattggtatcctgaaaatgaaagtggccgaaaag
gatctggagtacattaaaagcccaaaacctgtggaaacaaaaccagtggcaacggtgaaa
ggaagagattttcacgtcagccttgagcttgatttacggggcgagcgctatgaaaacgcg
ctcttaagagtcgagaaatatttagatgatgccctgctggctggatatccccgtgtctca
atcattcatggtaaagggaccggtgcattgaggcagggtgttcaggaatatttgagaaat
cacagatctgtaaagaaaatccggtttggtgaagctggagaaggcggtacaggggttaca
atcgttgaattcaaataa
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