Cytobacillus firmus: NAF01_20625
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Entry
NAF01_20625 CDS
T08260
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00130
Ubiquinone and other terpenoid-quinone biosynthesis
cfir01100
Metabolic pathways
cfir01110
Biosynthesis of secondary metabolites
cfir01240
Biosynthesis of cofactors
Module
cfir_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
NAF01_20625 (menD)
Enzymes [BR:
cfir01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
NAF01_20625 (menD)
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Motif
Pfam:
TPP_enzyme_N
TPP_enzyme_M_2
TPP_enzyme_C
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
URT70184
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Position
complement(4090948..4092693)
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AA seq
581 aa
AA seq
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MNHQETLTSYIAAFVAELVKSGVEDVVVSPGSRSTPMAMVMAEHPELRVHIHVDERSAAF
FALGIAKASQKPAALLCTSGTAAANYYPAIVEARYSRVPLIVLTADRPHELRDVGAPQAI
DQIHLYGNNVKWFVEMAPPENSAEMLRYARTVCARAASAAKSSPAGPVHLNFPFREPLVP
QLDRADLFELSERREGYVNIQGGKLSLPNEEYKEMAQVLNSAQKGIIICGHLEKSGFPAA
VIKLSEKLNFPIIADPLSQLRSGLHDGSFIMDAYDTFLKNDDAKKALKPDVIIRFGATPV
SKPLSIFMKENSTARQIIVDGGGGWRDPSLLSTEMIHCDELLFCESVTSYLNTSENDEFI
ALWKKINDLTRVRLADINEADELSEGKLFFQLAEMLPEGSTLFVGNSMPIRDLDTFFHFN
QKGIKVMANRGANGIDGTVSTALGAGMASQPLYLVLGDLTFFHDLNGLIASKLYGIDINI
LLINNNGGGIFSFLPQANYPNNFEKLFGTPLDLDFSHAIKMFGGQYDLISDWEHFISAFK
RNMGIPGLKVLEITTNRDRNLTEHRELWNSVSREISRLLEG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcatcaggaaactttaacttcatatatagccgcatttgtggctgaactagtaaaa
agcggggtagaggatgtcgtggtcagtcccggctcccgttctaccccgatggcaatggta
atggcagagcatccggagcttcgtgtacatattcatgtagacgagcgttcggctgccttt
tttgcgttgggaattgctaaagcatcccaaaaaccggcagctttgctgtgtacatccgga
acagctgcagccaattactaccctgccattgtggaagccaggtattccagggtgccgcta
atcgtgcttacggcagaccggcctcatgaattaagggatgtaggcgctccacaggcgatc
gatcagatccatttgtacggtaataatgtaaagtggtttgttgaaatggcccctcccgag
aattcagcagaaatgctgcgttatgcccggacagtatgtgcgagagcagcttccgccgct
aagagttcgccggctgggcctgttcaccttaatttccctttccgtgagccgctagttccc
cagctggatcgtgctgatttatttgagcttagtgaacgaagagaagggtatgtaaatatt
cagggtggcaagcttagtttgcctaacgaagagtacaaagaaatggcacaggttttaaac
tccgcacaaaaagggattataatttgcggtcatctggaaaaatccggcttcccggctgcc
gttattaaactgtcggaaaagctgaactttccgatcattgccgatccattatcacagttg
agaagcggactgcacgatggcagctttattatggatgcatatgatacctttttgaaaaat
gacgatgcaaaaaaagcgcttaagccggatgtcataattcgcttcggtgctacgcctgta
tcaaagccattgtccattttcatgaaagaaaacagtactgcccggcagattattgttgat
gggggcggcggatggcgtgatccttcactgctctcgactgaaatgattcattgcgatgag
ctgctgttctgcgaatctgtcacctcgtatttaaacacttccgagaatgatgaattcatt
gcactatggaaaaaaatcaatgatcttacaagagtaaggcttgctgatattaatgaagca
gatgaattgagcgagggtaaattatttttccagctcgctgaaatgctgccggaaggctcg
acattatttgtaggaaacagtatgcctattcgggacctggatacttttttccattttaat
caaaaaggcattaaagtaatggctaacaggggagcaaatggcattgatggcactgtttca
actgctcttggtgccggaatggcatcccagccgctctatcttgtgctcggtgatttaacc
ttctttcatgatttaaatggtttaattgcctctaagctgtatggaattgatatcaatata
ttgctgattaataataatggaggcggaatcttttcattccttcctcaggcgaattacccc
aataactttgaaaaactgttcggaacaccgctggatcttgatttcagccatgccattaag
atgtttggcggacaatatgatttaatatcagattgggaacattttatttcagccttcaaa
cggaacatgggcatacctggcttgaaggtattggaaattacgacaaaccgggacaggaat
ttaaccgagcatcgagaattgtggaattctgtttcccgggaaataagtcgattgctggaa
gggtga
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