Cytobacillus firmus: NAF01_20890
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Entry
NAF01_20890 CDS
T08260
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
cfir
Cytobacillus firmus
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfir03000
]
NAF01_20890
Transcription factors [BR:
cfir03000
]
Prokaryotic type
Helix-turn-helix
XRE family
NAF01_20890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_26
HTH_31
Phage_CI_repr
SinI
HTH_25
HTH_IclR
HTH_37
DUF896
MarR
HTH_35
Ndufs5
DurN
HTH_20
MarR_2
Motif
Other DBs
NCBI-ProteinID:
URT70213
LinkDB
All DBs
Position
complement(4133871..4134221)
Genome browser
AA seq
116 aa
AA seq
DB search
MIGKNIYEIRKRRGLTLTELADRAGIAKSYLSNIERNLNKNPSVNVMEKLALVLDVELKE
LLNTEKPTETQNHQLDKEWLEFVTDLKNSGIDKEQLEEYKKLLEFIKWQNIKDLNN
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgataggaaaaaatatttatgaaattcgcaaaagaagaggtctaaccttaacagagctt
gcagatagggcggggattgcaaagtcatatctaagcaatatcgaaagaaacctgaataaa
aatccttcggtaaatgtaatggaaaaactggctttggttttggatgtcgagcttaaggaa
ttattgaacacagagaagccaaccgagactcaaaatcaccagcttgataaagaatggtta
gaatttgtaacggatttaaagaattcgggaattgataaggaacaattggaagaatataaa
aaattactggaatttattaaatggcagaatataaaggatttaaataattaa
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