Cytobacillus firmus: NAF01_21100
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Entry
NAF01_21100 CDS
T08260
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K06714
arginine utilization regulatory protein
Organism
cfir
Cytobacillus firmus
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfir03000
]
NAF01_21100
Transcription factors [BR:
cfir03000
]
Prokaryotic type
Helix-turn-helix
Other families
NAF01_21100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
PAS
HTH_8
PAS_9
AAA_5
AAA_2
AAA_3
AAA
Mg_chelatase
AAA_16
HTH_30
PAS_8
MCM
AAA_32
ATPase
NYD-SP28
RWP-RK
HTH_AraC
DUF3656
AAA_7
Motif
Other DBs
NCBI-ProteinID:
URT70252
LinkDB
All DBs
Position
4180325..4181746
Genome browser
AA seq
473 aa
AA seq
DB search
MNHREIEQLQLKNKIFQRILDEIDVGVHVVNEEGRTTFYNKKMAQIEGMDYEDVLDKNLL
DVFSFNQNEDSTLLQALKNGSKIKNAKQTYFNNKGQEITTINNTFPIMEDGEQIGAMEIA
RDVTKLEKLIRENMNKRGDTRYTFDSIIGSSDEINEVVEASKRATRTSSSVLIIGETGTG
KELFAQSIHNGSSRSSKPFISQNCAALPDSLIEGLLFGTKKGAFTGSIERPGLFEQANGG
TLLLDEINSLNPSLQAKLLRVLQEKTVRRVGDTKDRTVDVRIIATINEDPIDAISEDRLR
KDLYYRLSVVSLFIPPLRKRRKDIRDLAQFFIEKYNQLFGMNVAEINEEVMSKFEQYDWP
GNVRELEHIIEGAMNLIDQEETISYVHLPLHFRNKPQFKEEPNETGHLEDLLIQKNKPIK
SLEQYIQEAETYYLKKVLKHHGNNITQAAKSLCMSRQNLQYRLRKYGVRKENS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacagggaaattgaacagctccaactaaaaaacaagatctttcagcggatttta
gatgaaatagatgttggtgtccacgtagtgaatgaggaaggaagaacaactttctacaat
aaaaaaatggctcaaatagaaggcatggattatgaagatgtattggataaaaatcttctg
gatgtgttttctttcaaccaaaacgaagacagcaccttacttcaggcgctcaaaaatggc
agcaaaattaaaaatgccaaacaaacctattttaacaataaggggcaggaaattaccacg
attaataatacttttccaattatggaagatggcgaacagattggcgctatggaaatcgca
cgtgatgtaaccaagcttgaaaagctgatcagagaaaatatgaataaacgcggagacacc
cgctatactttcgatagtataattggctcaagtgacgagatcaatgaagtggttgaagcg
agcaaaagagcaacccggactagttcttctgtcctgattatcggagagaccggtacagga
aaagagctctttgcccaaagcatccataatggcagcagccgatcttcaaaaccatttatc
tctcaaaattgcgctgctcttccagacagtctgatagagggtcttctatttggcacaaaa
aaaggtgcatttacaggctccattgaaaggcctggattgtttgaacaggcaaatggcggg
actttgctgcttgatgaaatcaattcacttaatccatccctgcaggcaaagctattgaga
gttttacaggaaaaaacggtccgcagggtcggtgatacgaaggaccggacagtagatgtt
agaattatagcaaccattaacgaagacccgattgatgctatctcagaagaccgcctgcga
aaagatttatattacaggctgagtgttgtttccctcttcattccgcctctccgaaagaga
agaaaggatatccgggatcttgcacaatttttcatagaaaaatacaatcagctctttgga
atgaatgtagcggaaatcaatgaagaagtaatgagcaaattcgagcaatacgattggccg
ggcaatgtacgggaattggagcatattatcgaaggagccatgaatctgattgatcaggaa
gaaaccatcagctatgtgcatttgcctcttcatttccggaataagccgcaattcaaggag
gagccgaacgaaaccggtcatttggaggatttgctgattcagaaaaacaagcctattaaa
tcacttgaacaatatatacaggaagccgaaacctactatctaaagaaagtccttaaacac
catggcaataatataacccaagccgcaaaatccctttgcatgagccggcaaaatcttcaa
tataggctgaggaagtacggagtcaggaaagaaaacagctga
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