KEGG   Cytobacillus firmus: NAF01_23180
Entry
NAF01_23180       CDS       T08260                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
cfir  Cytobacillus firmus
Pathway
cfir00010  Glycolysis / Gluconeogenesis
cfir00020  Citrate cycle (TCA cycle)
cfir00260  Glycine, serine and threonine metabolism
cfir00280  Valine, leucine and isoleucine degradation
cfir00310  Lysine degradation
cfir00380  Tryptophan metabolism
cfir00620  Pyruvate metabolism
cfir00630  Glyoxylate and dicarboxylate metabolism
cfir00640  Propanoate metabolism
cfir00670  One carbon pool by folate
cfir00785  Lipoic acid metabolism
cfir01100  Metabolic pathways
cfir01110  Biosynthesis of secondary metabolites
cfir01120  Microbial metabolism in diverse environments
cfir01200  Carbon metabolism
cfir01210  2-Oxocarboxylic acid metabolism
cfir01240  Biosynthesis of cofactors
Module
cfir_M00009  Citrate cycle (TCA cycle, Krebs cycle)
cfir_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cfir_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
cfir_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:cfir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NAF01_23180 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NAF01_23180 (lpdA)
   00620 Pyruvate metabolism
    NAF01_23180 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NAF01_23180 (lpdA)
   00640 Propanoate metabolism
    NAF01_23180 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NAF01_23180 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NAF01_23180 (lpdA)
   00310 Lysine degradation
    NAF01_23180 (lpdA)
   00380 Tryptophan metabolism
    NAF01_23180 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NAF01_23180 (lpdA)
   00670 One carbon pool by folate
    NAF01_23180 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cfir04147]
    NAF01_23180 (lpdA)
Enzymes [BR:cfir01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NAF01_23180 (lpdA)
Exosome [BR:cfir04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NAF01_23180 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored DAO HI0933_like FAD_binding_2 AlaDh_PNT_C Lys_Orn_oxgnase NAD_binding_8 Thi4 3HCDH_N FAD_binding_3 TrkA_N Trp_halogenase
Other DBs
NCBI-ProteinID: URT70649
LinkDB
Position
complement(4623560..4624960)
AA seq 466 aa
MEKTYDVIVIGGGPGGYVAALHAAELGKKTAVIEADFLGGTCLNRGCIPSKTYLKHSEII
EQIEKARDWGIDSGELTLSLSKMRQRKDEVINRLRSGISYLLKQGKIDIYNGFGLIQKDG
NIRVTMGSEEKVLKSEKVILATGSTPAIPKIPGLEAVQYETSDTIFDLEEIPESVIIIGG
GVIGVEFATIFASLKSDVTIIEAASQIVPSEDSEASKFLTKSLKKKGIKIHTGVSVQDVN
ETGGLKQVKCSDSKGNIVSFDAASLLVCTGRRPNLSAAKEVNIEHNGPFIKVNDRLETSL
PNVYAVGDIIGGWQLAHAASAEGTVAAANAAGGNEKIDYKVMPRCIYTLPEIASVGLTED
EARKQGLDVRVERFDFAGIGKALSAGEPEGFTKIIYEAKYGEIIGAVMAGSHVTELIAEA
SAFMYLEGTIEEAAKMIHPHPSLSESFYEAAVKAKYKLNSSHKVLT
NT seq 1401 nt   +upstreamnt  +downstreamnt
ttggagaaaacatatgatgtgattgttataggtggaggacctggaggatatgttgccgct
cttcatgcagcggagttaggtaagaagacagcagtaattgaagccgactttctgggggga
acctgtttaaatagaggctgtatcccctctaagacttatttaaaacactcagaaataatt
gaacaaattgaaaaagcaagggattggggaatcgattcaggtgagttaaccttatctcta
agtaaaatgagacaaagaaaagatgaagtgataaatcgtttgcgcagcggaatctcctat
ctgctcaaacaaggaaaaatagacatttataatggcttcgggttgatccaaaaagatgga
aatattagagtaacaatgggttccgaggagaaagtgctaaaatccgaaaaggttattctt
gctacaggctcgactccagctattcccaagattccaggtcttgaagcagttcaatacgaa
acgagtgatacgatctttgatctggaagagatacccgaatcggtgattattatagggggc
ggagtaattggggttgagtttgcaacaatcttcgcatctctaaaatcagatgtaaccatt
atagaagcagccagtcagattgtgccttctgaagatagtgaggcttccaaatttctgaca
aaatcattaaaaaagaaaggcatcaaaatacatactggcgtcagtgtccaggatgtaaat
gagactggcggtttgaaacaagtaaaatgcagtgactcaaagggaaatatagtatcgttt
gatgcagcgtcactactggtttgcacaggccgccgtccgaatctttcagcagctaaagag
gtaaacattgaacataatgggccatttataaaggttaatgacagattggaaaccagcttg
ccgaatgtctatgctgtcggtgatataattggcggctggcaattagcacacgctgcaagt
gcggaaggtacggtagctgctgccaatgcggcaggcggcaacgaaaaaattgattataaa
gtaatgccccgctgcatttatacacttcctgaaattgcatcagtaggattaacagaggac
gaagcgcgcaagcaagggctggatgtaagagtagaaaggttcgattttgctggaattggt
aaagccttgagtgctggggagccggaaggctttacgaagatcatttacgaagcaaaatac
ggtgaaattatcggagcggttatggcaggctcacacgttacagaattaattgctgaggca
tctgcttttatgtatctcgaaggaacaatagaagaagctgcaaaaatgattcatccacac
ccatctttgtccgagtccttttatgaggcagctgttaaagcaaaatacaaattaaacagt
tctcataaggtgctcacctaa

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