Cytobacillus firmus: NAF01_23990
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Entry
NAF01_23990 CDS
T08260
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
cfir
Cytobacillus firmus
Pathway
cfir03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NAF01_23990 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfir03021
]
NAF01_23990 (rpoE)
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_23990 (rpoE)
Transcription machinery [BR:
cfir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NAF01_23990 (rpoE)
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NAF01_23990 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
ColG_sub
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
URT70804
LinkDB
All DBs
Position
complement(4796248..4796829)
Genome browser
AA seq
193 aa
AA seq
DB search
MSLEQFSKEELQEMSLIEVAYELLTSKKEPMAFNDIMNEVAKLMNLSEEQVKGKIAQFYT
DLNIDGHFIGLGDNRWGLRSWYPVDQYEEEVVTVIKPKKKKAKKKGDDDLDLEDYDELDE
EDIDYDDIDGFDDDDLTEDDDDDLLDDDDDLEDDDDFEDDEDIVEKDEEFDLGDDDEELE
EDDLDADEDEEDL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttggaacagttctcaaaagaagaattgcaggaaatgtcattaatcgaagtggct
tatgaacttctgacaagcaaaaaagaaccaatggcctttaatgacatcatgaatgaagta
gctaaacttatgaacctttcagaggaacaagtcaagggaaaaattgcacagttctataca
gatttaaatatagatggccatttcatcggattgggcgataaccgctggggtcttcgttca
tggtatccggttgaccaatatgaagaagaagtcgtaacggtaatcaagcctaagaagaaa
aaggcgaagaaaaagggcgacgacgatctcgatcttgaagattatgatgaactggatgaa
gaggatatcgactacgatgatatcgacggattcgatgatgatgacctgactgaagacgat
gatgatgatcttctggacgatgacgatgatcttgaagatgatgatgatttcgaagacgat
gaagatatcgtagaaaaagatgaagaattcgaccttggcgatgatgacgaagagcttgag
gaagatgacctcgacgctgacgaagacgaagaagatttataa
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