Cytobacillus firmus: NAF01_24085
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Entry
NAF01_24085 CDS
T08260
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00550
Peptidoglycan biosynthesis
cfir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NAF01_24085
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cfir01003
]
NAF01_24085
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
NAF01_24085
Enzymes [BR:
cfir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NAF01_24085
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NAF01_24085
Glycosyltransferases [BR:
cfir01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NAF01_24085
Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NAF01_24085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
URT70823
LinkDB
All DBs
Position
4818338..4820407
Genome browser
AA seq
689 aa
AA seq
DB search
MELMTDQRFRKTMKYLRAFLIISLIGMALAAVMIGGILVYAKILGPPPLAVPQSTLFFSE
DGTVIGESHNGQKRYWAPLDDISPLLVDATVSIEDKNFFEHNGFDYKRIAGAALADLKAM
AKVQGASTISQQYARNLFLEHEKTWKRKLLEAFYTIRLEMNYTKKEILEGYLNTIYYGNG
AYGAQAASQFYFGKDAKELTLSEASILSGIPKGPGIYSPFASAEKAAQRQRVILQTMVKN
GMVSQKEADLAAAEELELVGEHMHPRAKTAPYFQDAVRNALKTQLKLDDRTIELGGLKVY
TTLDLKEQEIAEETVDKMISQDSEIQVGVVAMNPKNGYVKAMVGGRDYEESPFNRAVQAV
RQPGSTIKPLLYYAALEQGFTPSTPIRSEQTTFRFEDGTPDYTPHNFNSKYADDEITMAQ
ALALSDNVYAVKTHLFLGEETLVNTAKKFGITSKMAKVPSLALGTSGMRVIELANAYSMF
ANGGKKVSPVLIKRVENHKGEVIYEQEPFQMKVLKPDLAFVMTHMMTGIFDRKLNGYAQV
TGSTVINDMTRPYAGKSGSTETDSWMAGFTPQLVTAVWTGYDKGQVITKTVEKTYAKNIW
IRFMEEAHKGKPAKEFKAPKGTAGIYIDPANGKIAGENCPVKRLTYFAEGTEPAEYCTDH
LNHKKEEKSEQPEKKPETPWYKKLFRWAS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ttggagttaatgaccgatcagcgattcagaaaaacaatgaaatatttgcgtgcatttctc
attatcagcttaataggaatggctttagccgctgtgatgattgggggcattctggtatat
gccaaaatcctgggaccgccgccgctcgctgttccgcagtcgactttatttttctctgag
gatggcactgtgattggagaaagccacaacgggcaaaagcgctactgggcacctcttgat
gatatcagcccgcttctggttgatgcgacggtttcgattgaggataaaaatttcttcgaa
cacaatggctttgattataaaagaattgccggcgccgctctcgctgacctcaaagcaatg
gctaaggttcagggcgccagcaccatcagccagcagtatgcccgcaacctgtttctcgag
cacgaaaaaacctggaagcggaagctgcttgaagctttttataccataaggcttgagatg
aattatacaaagaaggaaattcttgaaggctatttaaatacgatttattacggcaatgga
gcttatggcgctcaggcagcaagccagttttatttcgggaaggatgccaaagagcttaca
ttgtctgaggcgtccattttatccggaatccctaaagggccaggcatttattcgccattc
gcatcagcggaaaaagcagcacagcggcagagggtgattctgcagaccatggtgaaaaac
gggatggtcagtcaaaaggaggcggatcttgctgccgcagaggagcttgagctggtcggg
gagcacatgcacccgagagcgaaaacggccccctatttccaggatgcggtccgcaatgct
cttaaaacgcagctgaagctggatgaccggaccattgaattgggcggattgaaagtttat
accactttggatctgaaggaacaggaaatcgcggaagaaacagtagataagatgatttca
caagactcggagattcaggtcggagttgtggccatgaatccgaaaaacggctacgtcaag
gcgatggtcggcggccgggattatgaggaaagtccctttaaccgggcagtccaggccgtc
aggcagccgggatcgacgatcaagccgctgctttattacgcagcattggagcagggattc
accccttccactccaatccgcagcgagcagacgacgttccgctttgaagacggcacaccg
gactacacaccgcataatttcaacagcaaatatgcggatgatgagatcaccatggcccag
gccctggctttatctgacaatgtatatgcagtgaagacccacttatttttaggagaagag
acgcttgtcaatacagccaagaaatttggcatcacttctaaaatggcgaaggttccttcc
ctggcactcggcacatcgggtatgagagtcattgagctggctaatgcctacagcatgttt
gctaacggcgggaaaaaggtatcgccggtgctgattaagcgagtggaaaatcataaaggc
gaagtcatttacgagcaggagccattccagatgaaggttctgaagcctgatctcgccttc
gtcatgacccatatgatgacgggaatctttgaccggaagctgaacggctatgcccaggta
accggcagcaccgttatcaatgatatgacccgcccgtatgcaggcaagtcgggctcaacc
gaaacggacagctggatggcaggctttacacctcaactggttactgcagtatggaccggc
tatgacaaaggccaggtcattacaaaaaccgttgaaaaaacgtatgccaaaaacatttgg
atccggtttatggaagaagcccataaagggaagccggccaaggaattcaaagcacccaaa
ggcacagccggcatctacatcgacccggccaacggaaaaatagccggggaaaactgcccc
gtcaagcgccttacctacttcgcagaaggcacagaaccagcggaatactgtacagaccac
ctgaaccacaaaaaagaggaaaagtcagagcagcctgaaaagaagccggagacaccttgg
tataagaaactgttccggtgggcttcgtga
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