Cytobacillus firmus: NAF01_24425
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Entry
NAF01_24425 CDS
T08260
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
cfir
Cytobacillus firmus
Pathway
cfir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NAF01_24425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfir03000
]
NAF01_24425
Transcription factors [BR:
cfir03000
]
Prokaryotic type
Helix-turn-helix
Other families
NAF01_24425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
HTH_31
RapH_N
TPR_19
TPR_12
TPR_2
TPR_14
TPR_8
TPR_1
PFS1_middle
Motif
Other DBs
NCBI-ProteinID:
URT70887
LinkDB
All DBs
Position
complement(4882691..4883947)
Genome browser
AA seq
418 aa
AA seq
DB search
MLAGEIIKFHRQRAGLTQEDLGKGICSVTHVSKIERGVTPYSSEIIQMFSERLNLDIDQE
INRFANLGERLQHWHKTIIMQNMKEAEKIKKELEGIPISLSSSHAAFYELLLARLHLKKL
ELEQAEGILIHIQNDYPNLQAYEQNMLKHAWGIYYILRYRDSKAGNYHKAIEFLKDINME
EYGNHEYYYHLAAAYYWTNSKIAAYAYANKALVHFRETDNYIGAITAESLMLAQEGNDLQ
ADFNELEKSYQRLIRNCDLLNLPNKKSLLLNNLGYEYWRRKEYRKAQTVLEEALGLVAKP
SALYLQRLQNYINACLEGKLLRKAVLLKRAREGMSMTKNLENRFYKIIFKLLILRIEEQS
EQYYRYIEHEALPYFLSISNAMFTNRFGKQLYQYYVETEQYEKAVQVSNIFIESIACE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttagctggagaaataattaaatttcaccgccaaagggcaggtcttacacaagaggat
ctcggcaagggcatttgttcggttacacatgtgagtaagatcgagcgtggggtgacgccg
tattcctctgaaattatccagatgttttcagaacgtctgaacctcgatattgatcaggaa
atcaaccggtttgccaatctgggagagcggcttcagcactggcacaagacgatcatcatg
caaaatatgaaggaagcagagaaaattaaaaaagagcttgagggcattcccatcagcctt
tcttccagccatgccgccttttatgaattgcttcttgcccgattgcacttaaaaaaactg
gaattggaacaggcggaagggattttgattcatatacagaatgactatcctaatcttcaa
gcctatgagcaaaatatgcttaagcatgcctggggaatctattatatcttaagataccgg
gattcaaaggccgggaattatcacaaagcgattgaatttttgaaggatataaacatggag
gaatacgggaatcacgaatactattaccacttggcggccgcctattattggaccaattct
aagatagcggcttatgcctatgcaaataaggctcttgtacacttcagggaaacggataac
tacatcggtgcgattacggcagagtcccttatgctcgcacaggagggcaatgatttacag
gcggatttcaacgagctggagaaatcttatcagagattaatccgtaattgtgacctgctg
aatttgcctaataaaaagtctttgctgttaaacaacttaggctatgagtattggagaagg
aaggaataccggaaggcgcaaacagtattagaggaggcccttggcctggtggctaagcca
tctgctctgtatcttcagaggctgcaaaattatattaatgcctgtctggaagggaagcta
ttgcgaaaagcagtgctgctgaaaagagcccgcgaaggaatgtctatgacaaagaatttg
gagaacaggttttacaaaatcatattcaagctccttattctgcggattgaagaacagagt
gagcaatattacagatatatagaacacgaggcacttccttatttcctttcaatcagcaat
gctatgtttaccaaccggtttggcaagcaattgtaccaatattatgtggagacggagcaa
tatgagaaggctgttcaggtttcaaatatctttatagaatcgattgcgtgtgaatga
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