Colletotrichum fioriniae: CFIO01_00017
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Entry
CFIO01_00017 CDS
T04796
Name
(GenBank) non-repetitive/WGA-negative nucleoporin
KO
K14312
nuclear pore complex protein Nup155
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CFIO01_00017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_00017
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CFIO01_00017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Phasin_2
BRR2_plug
Motif
Other DBs
NCBI-ProteinID:
EXF86320
UniProt:
A0A010RCD4
LinkDB
All DBs
AA seq
1399 aa
AA seq
DB search
MSYPQMTPMRPVPGAFLNTPAASRFANDNEPVRRRLFAEGDAPSSNSGALVAGSNLAPAT
IASTSTSGGLVSTSSAQAPQQNLPPVTRAAQAVNQFLQSDENYPELDSYCRPGASSDYDF
NTLDSPWAPFHKTQMYPIPNQVFSHYNTGQLQTLMGLFAEINHAWVVIDNSLFLWDYTHP
DPELIGFEDQPHTIHAVALVAPKPGIFVNTITHILVVATSSEMILLGLSAETTPSGTKTV
SLYSTKLNLPLRGTDVRVIAGTADGRIFFGGSNDTDIHELYYQQEEKWFSNRCGKINHTN
PGWSSVVTLQSGFWAQKSPEGLQSIVIDDSRKLVYTLSTRSTIRTYHMDGPNKLTKVIEK
ERNACLRDITHMITQSPLLNDRTAFVAISAIPSREASKLHLMALTNTGCRLFLSATSSAS
YMIGGVSSNTPPQSMQVQFIKFPPSDKPGRSGTNSAGDAVIDLGSRALELSRLGARFAPG
YFLDFVVKDNDPNIDLLFVSAPETGRIKANSSSAALKYYEHGNWIDIGSRAEDVGLVTKP
FSAANQPVGFGNELAVQFDQPATEFAVLTNTGVHIIRRRRLVDTFAAAIRGAVGDEGLEL
ETRKFISRYGRVETISCALAVACGHGGDARPGATRAIDQATEDRARTVFVDYGGQPSITE
ADGTPLNTTSVRLSPRHDALSVYLTRLIRTLWKNHVVALAASPTGGVAIQSMVPIAKLHS
TQEQLERLRRFLDANKSFIQGLSGPSDLQRVASKQEEVALQAEHQALHALQKLMESISEG
ISFVLMLFDERVSDIFTRLDATAQQGLKSLTYESLFSQSSGKDLAKLLVKSIVNRNIESG
SNVETVADALRRRCGSFCSPDDVVIFKAQEQLKRASEQPSNSNQSRALLHESLRLFERVA
GALSFANLHNAVSQYIDLKYYAGAIQLCLTVAREKDRGNTALSWVHDGKPANDPRANAFS
ERRKCYELIHEALQHLDAASSREPETIDGRLTLMGTKRLEAYSVVNDSDDEVFHFDLYEW
YIEQGWTDRILAIESPHVITYLQSLARSNVDHADLLCRFYTQRERYFEAAQVQNDLAQSD
FAIGIKDRIILLSKAKANASVATAGVGRQQQQVLAHEVSELLDIANIQDDLLERLKADSR
VDPDRKAQIEEALDGQVISLSDLFNQYADQANYYDLCLLIYHSADYRNPSTISQTWVSLI
EQIHEEAVERMEEAGPGIPVLPSPYESVSVKVQNIAHRTSLDSFIFPVPVLLPEICRYAV
EYHQDAEIGADPTWPVQLFLSLGVSNDMVTRVLESVFDTQDYGFSGNNRNRIIELIVFSV
DVWQREVKRRGAASMKGDGALGAWVKDLLSRCEASLPPAGHGSNPGGMDLSEVRRRLRTV
KRDVDGLVERGPSGSLRFL
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccacagatgacgccgatgcggccggtgccaggcgccttcctcaacacgccc
gcggcctctagattcgctaacgacaacgagccggttagacgacgactctttgcggagggc
gacgcaccttcaagcaatagtggcgcgctggtggcaggatcaaatttggcacccgcgacg
attgcatcaaccagcacaagtggaggattggtgtcgacctcatctgctcaagctccccag
caaaaccttccgcccgtcacgagagcagcacaagcggtcaaccagttcctccagtccgac
gagaactaccccgagctcgattcctactgcaggccaggagcatcgtcagactatgacttc
aacacgctcgactcgccctgggcgcccttccacaagacccagatgtacccgattccgaac
caggttttcagccactacaataccggccagctccagacgttaatgggcttgttcgccgag
atcaaccatgcttgggtggtcatcgacaactcgctattcctgtgggactacacccacccg
gaccccgaacttatcggcttcgaggaccaaccgcacacgattcacgccgtcgctctcgtt
gcacccaagcctggcatttttgtcaacaccattacgcacattctagtcgttgcgacgtcg
tccgagatgattctcctcggtctttctgccgaaaccacgccatcggggaccaagaccgtt
tcgctttatagcaccaagcttaacctccctctccgaggcaccgatgtcagagttattgct
ggcactgcggacggccgcattttcttcggaggcagcaacgataccgatatccacgaactt
tactaccagcaggaggagaaatggttttcgaacagatgcggcaagatcaaccacaccaac
ccaggctggtcttcagtcgtcactctccagagcggattctgggcacaaaagtctccggaa
ggtcttcagagcattgttattgacgattcccggaagctcgtctacacactttcgacaaga
tctaccattcgtacataccacatggacgggcctaacaagctcaccaaggtgatcgaaaag
gagcgcaacgcctgcctacgcgacatcacccacatgattactcagtcccctctgctcaac
gacagaactgcctttgttgccatcagcgctattccatcacgagaggcgtcgaagctgcac
ctcatggccctgaccaacaccggctgccgtctgtttcttagcgctacgagctctgcctcg
tacatgattggcggtgtttcttcaaacacgccccctcaaagcatgcaggtccagttcatc
aagttccccccatcggacaagcccgggcgatccggtaccaacagcgcgggtgatgcggtt
atcgatcttggctcaagggcgttggagttgagcaggcttggagctcgatttgcgcctgga
tacttcttggatttcgtcgttaaggacaacgatccgaacatcgatctgctctttgtttct
gcccccgagacaggccgaatcaaggccaactcgtcttccgccgcgctcaagtactacgag
cacgggaactggatcgatattggaagcagagccgaagatgtcggtttggtgacgaagccg
tttagcgcagcaaaccagcccgtcggctttggaaacgagcttgcggttcagttcgaccag
ccggccaccgagtttgccgtgctgaccaataccggcgtgcacataatccgccgccgccgg
ttggtggatactttcgctgccgctatccgtggtgcagtgggagacgaaggtctggagctg
gagactcggaagttcatttctcggtatggccgcgtagaaaccatctcctgcgctcttgct
gtagcttgtggtcatggtggtgatgccaggccaggcgccacgcgcgcgattgatcaggcg
acagaagaccgcgccaggaccgtatttgtcgactatggtggccagccctctatcacagag
gcagatggtacccctctcaacacaacctccgttcgcctgtcacccaggcacgatgctctc
agtgtctatctcacccgcctcatccgcacattatggaagaatcacgttgtcgctcttgct
gccagccctaccggcggcgttgctattcaatccatggtacccatcgcaaagcttcactcc
actcaggagcagcttgagcgtctccgtagattccttgatgcaaacaagagtttcattcag
ggtctgtcgggtccttccgaccttcaaagagtggccagcaagcaagaggaagtcgcactc
caggcagagcaccaagctctgcatgcacttcagaaactgatggagagcatctccgagggc
atctcgttcgtcttgatgctctttgatgagcgtgtcagtgacatctttacgcgactggat
gcaacggcgcagcaaggactgaaaagtctcacatatgagagcctgttctcacagtcttca
ggcaaagatcttgccaagctattggtcaagtctatcgtcaatcgcaacattgagagcgga
tccaacgtcgagacggtcgcggatgctcttcggagacgctgcggcagtttctgcagccct
gatgatgttgtcatcttcaaggctcaggagcagctgaagagagcgtctgagcagccatcc
aacagcaaccagtctcgcgcgcttctgcatgagagtttgaggctgtttgagcgcgtcgcc
ggtgccctttcatttgccaacctacacaacgccgtgtctcagtacatcgacctgaagtac
tacgccggtgcaatccagctctgcctcactgttgcccgtgagaaggatagaggcaacacc
gctctgtcatgggtccatgatggcaagcccgctaacgaccctcgggctaacgccttctcg
gagcgtaggaaatgctacgaactcatccacgaggctctgcaacacctagatgccgcgtca
agcagggaaccggagacgattgacggtagactgaccttgatgggcacaaaacgcctcgag
gcctacagcgtagtgaacgactcggacgacgaggtcttccacttcgacctttacgagtgg
tacatcgaacagggatggactgatagaatccttgctatcgaatcaccacacgtcatcaca
tacctccagagtctggcgaggagcaatgtggaccatgccgatcttctctgcaggttctac
acccaacgcgagcggtactttgaggctgctcaagtccaaaatgatcttgcccaatcagac
ttcgccatcggtatcaaggacagaatcatccttctcagcaaggccaaggcaaatgccagc
gtcgctacggcaggagttggcaggcagcaacagcaggtcctggcccacgaagtcagtgag
cttctcgacattgccaacatccaggatgacttgttggagaggctcaaggccgacagccgc
gttgaccctgatcgcaaggctcaaatcgaggaagcgttggatggccaggtgattagcttg
tcagacctgttcaaccaatatgccgaccaggcgaattactatgatctgtgcctcctcatc
taccacagcgccgattatcgcaaccccagcacaatttcccagacatgggtcagcctcatc
gagcagatccacgaggaggctgtagagcgaatggaggaagctggtccgggcatccctgtt
ctgccctcaccctacgaatctgtgtcggtcaaggtgcagaacatcgcccaccgcacttcc
ctggatagcttcatcttcccggtgccagtgctgcttcccgagatctgtcggtatgccgtt
gaataccatcaagatgctgagatcggtgcggatcccacctggcctgtgcagcttttcctc
agccttggcgtatccaatgacatggtcactcgcgttctcgagagcgttttcgatacccaa
gactatgggttcagcggtaacaaccgcaaccgcatcattgagctcattgtgttctctgtt
gatgtttggcaacgcgaggtcaagcgtcgtggtgctgcctcgatgaagggcgacggtgct
cttggtgcttgggttaaggacctgcttagcagatgcgaggcatccctgccccctgctggc
cacgggtcgaacccgggtggtatggacttgtcagaagtgcggagacgtctgcggacggtg
aagagagatgtcgatggcctcgttgagagaggtccctctggaagcttacgcttcctgtaa
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