Colletotrichum fioriniae: CFIO01_00101
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Entry
CFIO01_00101 CDS
T04796
Name
(GenBank) helicase associated domain-containing protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CFIO01_00101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfj03041
]
CFIO01_00101
Enzymes [BR:
cfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CFIO01_00101
Spliceosome [BR:
cfj03041
]
Complex C
Other components
Step II factors
CFIO01_00101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
AAA_22
WHD_HA2
DEAD
AAA_19
AAA_30
nSTAND_NTPase5
T2SSE
nSTAND3
AAA_16
PhoH
Cas3-like_C_2
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
EXF86404
UniProt:
A0A010S6N8
LinkDB
All DBs
AA seq
1200 aa
AA seq
DB search
MDDLLNLELLSLVSKVTSELQNHLGVSDKTLAEFIIAQRVDAKDYDGFKKKLAGMGADFP
PSLVESVDRLVLTMHPKMKGKAKKNSNGAGNSDEHHHRSAAEKDEIFRGLSVPDKPVAYD
SIGDGVDAIDDTLALLEGLEGKARKDKSDSRKRSRSPDDGRDSRRKRRGRSRSRERRKRD
KYRSRSRSHDDFESGPSLKQRSRRRNYDDEDDGRFRRAPEPEVDDAPQLHKVYSGHVTGI
KDFGAFVNLHGVRGKVDGLVHISRLVEGQRVNHPSDLLEKGQDVKVKVVNIEGTRIGLSM
KEVDQETGMDLYPEDRISSGANMQALGGGGGGRNGNMFDDGPMPPPQHQPRRQKKRMTSP
ERWEIRQLIASGVAKASDYPDLEEDYNATLTGDGELELEQDVDIEVREEEPPFLAGQTKQ
SLELSPIRVVKAPDGSMNRAAMSGTALAKERKELKQQEAEAAAAEDSKVDLSAQWNDPMA
DPDKRKFASDLRNAKSQMAQSKPDAVPEWKRAVAPKDQAFGKRTNMSIKDQRESLPVFAF
RRKFLDAVREHQVMVVIGETGSGKTTQLTQYLAEDGFANDGVIGCTQPRRVAAMSVAKRV
AEEVGTPLGEAVGYTIRFEDKTSPATKIKYMTDGMLQREILVDPDLRRYSVIMLDEAHER
TISTDVLFALLKKTMKRRKDLKVIATSATLDADKFSSYFDGCPIFTIPGRTFPVEVLYSR
EPESDYLDAALVTVMQIHLTEPPGDILLFLTGQEEIDTSAEILYERMKALGPNVPELIIL
PVYSALPNEMQSRIFDPAPPGCRKVVIATNIAETSITIDNIYFVVDPGFVKQNAYDPKLG
MDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPEIQRQNLSHVIL
MLKAMGINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLA
KVLIISVDMKCSAEMLIIVAMLNLPNVFYRPKEKQSQADQKKAKFHDPHGDHLTLLNVYN
SWKQSSYSSPWCFENFIQARSMKRAKDVHDQLVKIMDRYRHPVVSCGRHTQIVRQALCSG
FFRNAARKDPQEGYKTLIEGTPVYLHPSSALFGKQAEWVIYHTLVLTTKEYMHCTTSIEP
KWLVDAAPTFFKVAPTDRLSKRKQAERIQPLHNKYAGEDDWRLSAQRKGGRGGGGGGTWG
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctcttgaacctcgagctcttgtcgctcgtgtcaaaggtcacgtccgaattg
cagaaccatttgggcgtttccgacaagacgcttgccgaattcatcatcgcccagcgagtc
gacgccaaagattatgatggcttcaagaagaagctcgccggcatgggcgccgacttcccc
ccgagtttagtcgagagtgttgatcgtctggtgctcaccatgcacccaaagatgaaggga
aaagcaaagaagaacagcaatggtgccggcaacagcgacgaacaccatcaccgcagtgcc
gcagagaaggacgagattttcagaggtctgtcagtacccgacaagccggtggcgtacgat
agcataggcgacggcgtcgacgccattgacgatacgcttgcgctgttggagggcttggag
ggcaaggcgcggaaagataaatcagattcgcgcaagcggagccgcagtccagacgacggg
cgcgactcccggcggaagcggaggggtcgatcaaggtcgagggagcgaagaaagcgcgac
aagtacaggtcgagatcacgatcgcacgacgatttcgagagcgggccttcgctgaagcag
aggagtcggagacgcaactacgatgacgaagacgatggacgctttaggagggcgcctgag
cccgaggtcgatgatgcgcctcagttgcacaaggtgtatagcggacacgtcaccggtatc
aaggatttcggcgcctttgtcaacctacacggcgttcgtggcaaggtggatggtttggtt
cacatttccaggctggtggaaggccagcgggtcaatcacccgtccgatctgttggagaag
ggccaagacgtcaaagtcaaggttgtcaatattgaggggaccaggataggactatcaatg
aaagaggtggaccaagagacgggcatggatctctaccctgaagacaggatatcctcaggc
gcaaatatgcaagctctaggcggcggcggcggcggccggaacggaaacatgtttgacgac
ggaccgatgccgccgccgcagcaccagcctcgccggcagaagaagcgcatgacatcgccg
gaaagatgggagatccgccagctgattgcgtctggtgtcgcgaaggcctccgattacccc
gacctcgaagaagattacaacgcgacactgactggcgatggggagttggagctggagcag
gatgtggatatcgaggttcgagaggaggaaccgccgttcctggccggtcagacgaaacaa
tcattggaactgtcacccattcgagttgtcaaagcaccagatggctccatgaacagagct
gccatgtcaggcactgcgttggcaaaggagcggaaggagctgaagcagcaagaagcggag
gccgctgcggcggaagactccaaggtcgacctctctgcacagtggaatgacccgatggca
gatccagacaagcgcaagtttgccagcgatctacgaaacgccaagtcccagatggcccag
agcaagcccgacgctgttccggaatggaagcgagcggtagcgccaaaggaccaagctttt
ggcaagcggacaaacatgagcatcaaggatcagcgagagtcgttgcccgtgttcgccttt
aggcggaagttcttggatgctgttagggagcaccaagtcatggtggtaatcggagagact
ggttcaggcaagacgacgcaactgacgcaatatctcgctgaggatggcttcgccaacgac
ggagtcattggttgcacacagcccagacgtgtagctgccatgtctgttgctaagcgtgtg
gctgaggaagttggcacaccgctgggtgaggctgtcggttacacgattcgtttcgaggat
aagactagccctgcgaccaagatcaagtacatgacggacggtatgcttcagcgtgagatt
ctcgtcgatccagacctgaggcgctattcggtcattatgctcgacgaggctcacgagcgt
actatttctacggatgtcttgtttgcgcttttgaaaaagacgatgaagaggaggaaggat
ctcaaggttattgccacatcagcaacgctcgacgccgacaagttctcctcgtactttgac
ggctgccccattttcaccatccctggtcgcacgttcccggtcgaggtgctgtactcgcgc
gagcccgaatccgattacctcgatgccgcgctcgtcaccgtcatgcagattcaccttacg
gagccgccaggagatatcttgcttttcttgacgggccaggaagaaatcgacacatcggcc
gaaattttatacgagcggatgaaagcattgggacctaacgttccagagctcatcatccta
cccgtgtactctgcacttcccaacgagatgcagagtcgcattttcgatcccgcacctccc
ggctgccgaaaagtggttatcgccaccaacattgccgaaacatccatcacaatcgacaac
atttacttcgtcgttgaccctggtttcgtcaaacagaacgcttacgatcccaagttgggc
atggattctttggttgtcacgccaatttcgcaagctcaggcaaaccaacgcgctggacgt
gccggacgtactggacctggaaagtgtttccgcctgtacaccgaagcagcataccagtct
gagatgttgcctacaaccatccccgagatccagagacaaaacttgtctcacgtcattctc
atgctcaaggccatgggcatcaacgacctgttgcactttgactttatggaccctcctcca
atcaatactatgcttactgcattagaagagctgtacgcgctcagcgccctggacgacgag
ggtttgctgacgcgtctgggacgaaaaatggcagactttcccatggaaccgtctctagcc
aaggtgctcatcatctccgttgacatgaagtgctcagccgagatgctcatcatcgtcgcc
atgcttaatctccccaacgtcttttaccgacccaaggagaagcaatcgcaagcagaccag
aagaaggccaaattccacgacccgcacggcgaccacctcacgctactgaatgtctacaac
tcatggaagcagagcagctactcaagcccgtggtgtttcgagaacttcatccaggcgcgg
tccatgaagcgcgccaaggatgtgcacgaccagctcgtcaagatcatggaccggtatcga
caccccgtcgttagctgcggacggcacacgcagatcgtgcgccaagcgctgtgctctggt
ttcttccgcaacgcggcgcgcaaggatccgcaggaagggtacaagacgctcatcgagggg
acgccggtttacctccacccgagctcggcgctgtttgggaagcaggccgagtgggtcatt
taccacacgctcgtgctgacgaccaaggagtacatgcactgcacgacgagtatcgagccc
aagtggctcgtggacgccgcgccgaccttcttcaaggtcgcgccgacggatcggttgtcg
aagaggaagcaggcggagaggatccagcctctgcataacaagtatgctggggaggacgac
tggaggctgagtgcacagaggaagggtggtcgtggaggtggtggcggcgggacgtggggt
taa
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