Colletotrichum fioriniae: CFIO01_00112
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Entry
CFIO01_00112 CDS
T04796
Name
(GenBank) DEAD/DEAH box helicase
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfj03009
]
CFIO01_00112
Enzymes [BR:
cfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CFIO01_00112
Ribosome biogenesis [BR:
cfj03009
]
Eukaryotic type
90S particles
Helicases
CFIO01_00112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
DUF3298
Motif
Other DBs
NCBI-ProteinID:
EXF86415
UniProt:
A0A010RCQ6
LinkDB
All DBs
AA seq
826 aa
AA seq
DB search
MATPTKPPAKGSGKKQQPKVLKRDSRLEKRKQQQQTIEQLEKAVADFDPKSEYTSFSELP
LCETTRKGLEKSHFETLTDIQSRAVPLALKGSDILGAAKTGSGKTLAFIIPVLEKLYRAQ
WTEFDGLGALIISPTRELAAQIFEVLRKVGRYHNFSAGLVIGGKSLKEEAERLSKMNILV
CTPGRMLQHLDQTAGFDVDNLQILVLDEADRIMDMGFQHAVDALVDHLPSTRQTLLFSAT
QSKKISDLARLSLKDPEYVSVHEESTPKNLQQHYIVTPLHEKLDTLFGFIKANLKSKIIV
FFSSGKQVRFAYEGMRHLQPGVPLLHLLGKQKQLQRMEITKRFADANASVLFATDVVARG
VDFPAVDWVVQVDCPEDVDTYIHRVGRTARYERDGKAVLFLEPSEEAGMLKRLELKKVPI
NKITVKESKKKSIKDQLQSMCFSNPDLKYLGQKAFISYVRSIYLQKDKEVFKFNKLDLDA
YAASLGLPGAPQIKMRKGEDIKKVKNAPRKGMSSDEDEEDSDDAAAGPKKPKKPEVRTKY
DRMFERTNQDVLSGHYTKLVANGDEATGDATDPTAAAAGTTGADGDGEEDFLSVKRVLGD
DELDAESNLAPGAKPKVISYGGQDFIVDSKRREKALQSKKKMLKFKGRGEKLVFDEDGNA
HQIYELQNEDDFEKEGPAEELRQKFVEGEAARVKEADVDDKLAAKGRLKEKRLKRKQREA
EERGEGIPKSAEGPQVAGGGGGADDGEDEDPLALLRSLPIAGEGGGEYSGSEDERPKKKT
KKWFQDDSDEEREKKKKAKKGGKVLEIDHEPETLEDLEALASGLLN
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccacgaagcctcccgcaaagggatcagggaagaagcagcagcccaaggtc
ctcaagagagattcgcgcctcgagaagaggaagcagcagcagcaaacaatcgagcagctc
gagaaggccgtagccgactttgatcccaagagcgaatataccagcttctccgaactcccc
ctctgcgaaacgacccgaaagggcctcgagaaatcccacttcgagaccctcaccgatatc
cagtcccgcgccgtgcccctcgccctcaagggcagcgacatcctcggtgccgccaagaca
ggcagcggcaagaccctcgccttcattattcccgttctcgagaagctctaccgcgcgcaa
tggacagagttcgacggcctcggcgccctcatcatctccccgacccgcgagctcgccgcc
caaatctttgaagtcctccgcaaggtcggtcgctaccacaacttctctgccggtctcgtc
atcggaggcaagagtttgaaggaggaagccgagcgtctatccaagatgaacatcctcgtc
tgtacacccggtcgcatgctgcagcacctcgaccagacggccggtttcgatgtcgataac
ctccagatcctcgtgctcgacgaggcggatcgcatcatggacatgggcttccagcacgct
gtagacgccttggtagaccacctgccctccacgagacagaccctcctcttcagcgcgaca
cagagcaagaagatctccgacctcgcgcgcttgagtctcaaggaccccgaatacgtctcc
gtccacgaggaatccacgcccaagaacctccagcagcactacatcgtcactcccctccac
gagaagctcgacacccttttcggctttatcaaggccaacctaaagagcaagatcattgtc
ttcttctcctcaggcaagcaggtccgcttcgcatacgaaggcatgcgacacctccagccc
ggtgtcccgctcctccacctcctcggcaagcaaaaacagctccagcgcatggaaatcaca
aagcgcttcgctgacgcaaacgcctcggtcctcttcgccaccgatgtcgtcgcccgcggc
gtcgacttccccgccgttgactgggtcgtccaggtcgactgccccgaagacgtcgacacc
tacatccaccgcgtcgggcgtaccgcccgctacgagcgcgacggaaaagccgttctcttc
ctcgagcccagtgaggaggccggcatgctcaagcgcctcgagctgaagaaggtgcccatc
aacaagatcaccgtcaaggagagcaagaagaagagcatcaaggaccagctccagagcatg
tgcttctccaacccggacctcaagtacctcggccaaaaggcctttatcagctacgtccgc
tccatctacctacaaaaggacaaggaggtcttcaagttcaacaaactcgacctcgacgcc
tacgccgcgagtctcggcctccccggtgcgccgcagatcaagatgcgcaagggcgaggac
atcaaaaaggtcaagaacgcgccccgcaagggcatgtcctccgacgaagacgaggaggac
tccgacgacgcggcggcgggacccaagaagcccaagaagcccgaggttaggacaaagtac
gaccgcatgttcgagcgcacgaaccaggacgtcctctcgggccactacaccaaactcgtc
gccaacggcgacgaagccaccggcgacgcaaccgaccccaccgcagcagccgccggtacc
accggcgcagacggggatggagaagaagacttcctctccgtaaaacgcgtcctcggcgac
gacgaactcgacgccgaatccaacctcgcacccggcgccaaaccaaaggtgatatcctac
ggcggccaagacttcatcgtcgactccaagcgccgcgaaaaggccctccagtccaagaag
aagatgctcaagttcaagggccgcggcgagaagctcgtctttgacgaggacggcaacgcg
caccaaatctacgagctgcaaaacgaagacgatttcgaaaaggaaggccccgcggaggaa
ctccggcaaaagttcgtcgagggcgaggcggcgcgcgtcaaggaggctgacgtggatgat
aagctcgccgccaagggacggcttaaagagaagagactcaagaggaagcagagggaggcc
gaggagcgcggggagggcatcccgaagagtgccgagggaccgcaggtcgcgggtggcggc
ggcggtgctgacgacggcgaggacgaagatccgttggcgctgctgcggtcgttgccgatt
gcgggtgagggcggcggcgagtacagcggcagcgaggacgagaggccaaagaagaagacc
aagaagtggttccaggacgactcggacgaggagagggagaagaagaagaaggccaagaag
ggcggcaaggtgctcgagattgaccacgagcccgagacgttggaggacctcgaggctttg
gcttcgggcttgttgaactaa
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