Colletotrichum fioriniae: CFIO01_00217
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Entry
CFIO01_00217 CDS
T04796
Name
(GenBank) snf5/smarcb1/ini1
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_00217
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_00217
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
CFIO01_00217
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
CFIO01_00217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
GATA
Motif
Other DBs
NCBI-ProteinID:
EXF78222
UniProt:
A0A010QEC1
LinkDB
All DBs
AA seq
580 aa
AA seq
DB search
MDARPKPQAFLSTYAPRIRAYNNSLLTPNVASAPATTNSRVTKRGTTIINYAEDGYDEID
DDEDSGRRRPTGLRSLRRVDDSAISQDLLDKAGKDTDEPVEVQGIWRDWFGKGRQVRNDQ
QNSAQADLPLTLIPIRIELDIPSFLPQVAFPSAPHTVDTSLPQYRAQEMTPPYRLRDTFL
WNLHETVITTEQFAQTYVQDLDLPNRHNLMLDIARQIRTQLEEYAGVALHPLFHAQSQNS
GINDATKPNSMINQDETPTPAAVISRSDTPMLNGGIGTPSRFKDATSAPDVTAHASPIPV
DSDEYDHDDAYRCIVTLNINLQSALYTDKFEWSLLHPPGMPEAFASQTCQDLGLTGEWVP
AVTHSIYEAVLRLKKEACEAGGLVMGWNGVREFPNDATAGADAGWRYDPENLADPWEPKV
EILSKEEMEKREGDRERQIRRLRRETARFSSTTGLVGGVPFSGFGNVVEAPEEERMGRGE
RSKKKRRFRSLSPIGRSGTPGGRGTPDVGSGYGAGSGLTDTERLSWRCWHCCLWGSSVWA
VRPGPAGPRSLCQNCGLLYERDGKLPRQTKNMHLTVIRTA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccgaccgaagccccaggcgttcctgtctacctatgcgcctcgaatccgcgcc
tacaacaactctctcctgaccccgaacgttgccagcgctccggccacaaccaactctcgg
gtgacaaagcgcggcacgaccatcatcaactacgcagaagacggctacgatgaaattgac
gatgacgaggacagcggccgtcgtcgccctactggcctgcgcagcctgagaagagtggac
gattcggcaatcagccaggacctgctggacaaggctggaaaggacacggacgagccggtc
gaagtacagggtatttggagagactggtttggcaagggacgccaggtgcggaatgaccag
cagaattcggcgcaagcagatctgcctttgaccttgatccccatccgaatcgaactcgat
attccgtccttcttgccccaggtcgcctttccctcggcgcctcacaccgtcgacacatca
ctcccgcaataccgagcacaagaaatgacgccgccctaccggcttcgcgataccttcctc
tggaacctccacgagacggtcattacgactgaacaattcgcgcaaacatacgtgcaagac
ctcgacttgccgaaccgtcacaacctgatgctcgatattgccaggcagattcggacccag
cttgaggagtatgccggcgttgccctgcatcccttatttcacgcgcagtcgcagaactct
gggatcaacgacgccaccaagccgaactcaatgatcaaccaggacgagacgcccactcct
gccgcggtaatcagccgctccgacactccaatgctgaacggcggcatcggaacgccatcc
cggttcaaggacgcgacatcagcaccagatgttacagcccacgcaagccctattcctgtt
gactcggacgagtatgaccacgacgacgcctaccgatgtattgtcactctcaacatcaac
ctccagtcagcattgtataccgacaagtttgagtggtctctgctgcaccccccaggcatg
ccggaggcctttgccagccaaacatgtcaagaccttggattaacgggcgagtgggttcct
gccgtcacgcattccatttacgaagcagtattgcgccttaagaaagaggcgtgtgaagcg
ggtggattggtgatgggctggaacggagtacgcgagttccccaacgatgccacggctgga
gctgatgccggatggcgttacgatccggagaacctagccgatccctgggagcccaaggtc
gagatcctcagcaaggaagagatggagaagcgagaaggtgacagagaacggcaaattcgc
agactccgccgcgagactgctcgcttcagctcaactactggcctggtgggcggtgtgcca
ttctctggattcggcaatgtagtggaagctccggaagaagaacgtatgggcagaggcgag
cggtccaagaagaagcgtcgcttccgcagcctgagcccgataggccgatctggaacccct
ggcggacgcggaacgccagacgtgggatctggatatggtgcaggcagcggcttgacggac
acggagcgcttatcgtggagatgctggcactgctgtctctggggctcgagtgtgtgggcg
gtgagacctggacctgcagggccacggtcactatgccagaactgtggattgctatacgag
cgggatggtaagctgccgcgccaaaccaagaatatgcatcttacggtcatccgaacggcg
tga
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