Colletotrichum fioriniae: CFIO01_01374
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Entry
CFIO01_01374 CDS
T04796
Name
(GenBank) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03013
Nucleocytoplasmic transport
cfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CFIO01_01374
09122 Translation
03013 Nucleocytoplasmic transport
CFIO01_01374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_01374
03041 Spliceosome [BR:
cfj03041
]
CFIO01_01374
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CFIO01_01374
Spliceosome [BR:
cfj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CFIO01_01374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
CCDC90-like
SPATA1_C
DUF3450
Motif
Other DBs
NCBI-ProteinID:
EXF83148
UniProt:
A0A010SEF0
LinkDB
All DBs
AA seq
215 aa
AA seq
DB search
MVVNELVSDKKLGAVLQTSGYAQDQAAKLLHLLTEITRAAEESGSASPELQAALSKEQKL
LLTNISHLRGLHRSANFNARDTKAQTAEARQEVDRLHLQLQNLYYEQRHLEGEIEACESY
DHTYQKIPLIPVEEFIAEQPEHADADEDAMMIARIGHERAGREALEQQRLELVGRKQKLI
AENKKRKDDLANLDKDLEKFIDAAKPIQELFEKVV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcaacgagctcgtatcagacaagaaactcggcgcggtcctccagacctcaggc
tacgcccaagaccaagccgccaagctcctccatctgctcaccgaaatcacccgcgcggcc
gaagagtcaggatcagcttcaccagagctccaagccgccttgtcaaaggagcagaagctc
ctcctcacaaacatctcgcacctccgcggcctgcaccgctccgccaacttcaacgctagg
gacacaaaagcccagaccgccgaggcgcggcaagaggtcgaccgcctgcatctccagctg
cagaacctgtactacgagcagcgccatctcgagggcgagattgaggcctgcgaatcctac
gaccatacataccagaagatacctctcatccccgtcgaagaattcatcgccgagcaacca
gaacacgccgacgccgatgaggacgccatgatgattgcgcgaatcggccacgagcgagcg
ggacgagaagccctcgaacagcagaggctcgagttggtgggaaggaagcagaagctcatt
gctgagaacaagaagcgcaaggacgatctggccaacctcgacaaagacttggagaagttc
atcgatgctgcgaaacccatccaggagctcttcgaaaaggttgtatga
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integrated database retrieval system