Colletotrichum fioriniae: CFIO01_01416
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Entry
CFIO01_01416 CDS
T04796
Name
(GenBank) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFIO01_01416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_01416
Enzymes [BR:
cfj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFIO01_01416
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CFIO01_01416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
DUF7479
Motif
Other DBs
NCBI-ProteinID:
EXF83190
UniProt:
A0A010R366
LinkDB
All DBs
AA seq
1225 aa
AA seq
DB search
MAPSATSTEWDHQYNTVRRENLFRNPPKDHTAYPALQEAVSPHIDSFNALFTSDDKSLLA
RGIEDIGTKTYLDGDDRAGLEGKNRLSVRIKSVALQKSQLPPSNKFARNREILPSECRER
HSTYRGRLSATFEYRVNGGDPKEFVRELGQVPIMVKSNRCHLEGNSPAQLVQRKEESEEL
GGYFIVNGIEKIIRLLQVNRRNFPMAINRPSFQNRGQGYTPYGIIVRSVRPDETSQTNVL
HYLSDGNMTFRFSWKKNEYLVPVMMVLKALVDTNDRDIFEGLIGLSNTKSAKNSFLTDRV
ELLLRTYKSYGLYSKTETRAYLGEKFRVVMGVPDTMSNYDVGTEFLRKVVLVHLGNINVT
EKEDNDKFKMLLFMIRKLYALVAGDCAVDNPDAVQNQEVLLGGFLYGMIIKERLEEFLST
AVRLSLREWTRKHPATPFTSQDFAKEFPANIFRHANENLGNGLEYFLSTGNLTSPSGLDL
QQTAGFTVVAEKLNFLRFISHFRMIHRGAFFAELKTTTVRKLLPESWGFLCPVHTPDGSP
CGLLNHLAHKCKIMTESVDASKIPGLVAELGAVETSSAATDESVVIMLDGKLIGFCTPRE
SLRIADTLRFWKVEGTHGVPLQLEIGYVPPSNGGSYPGIYLSSAPARMVRPVKYLPLDKV
DFVGPYEQPYMSIAVVENEIVSGESTHVEETPTNMLSILANMTPFSDFNQSPRNMYQCQM
GKQTMGTPATALRHRTDNKMYRIQSGQTPVVRSPLHNAYGFDNFPNGFNAVVAVISYTGY
DMDDAMILNKSAHERGFGHGTIYKTKKVSLKEEQRTRATKNITKLFGFAPGGFVKGFYRG
LLDEDGLPYVGRMVQEGDVLCAWHTVSADYSGKLINLDGQTHYEKYKESETAFVEEVRVL
GSESGNEPAQTISIKLRVPRSPVIGDKFSSRHGQKGVASQKWPAVDMPFSESGIQPDIII
NPHAFPSRMTIGMFVESLAGKAGALHGLAQDCTPFKFNEENTAGDYFGHQLMKAGYNYHG
NEPMYSGITGEELAADIYVGVVYYQRLRHMVNDKYQVRTTGPVVPTTGQPIKGRKRGGGI
RVGEMERDALLAHGTAFLLQDRLLNCSDYTRSWICRSCGSFLSVQPTVSPFVGKKKQVTT
VRCRNCATRLDAGDAESAAKVEGEIWEDGQGNQWVGGENTTVVVVPGALKFLDVELAAMG
VKLKYRIDSKDAPRKGPLKPMKSLP
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctcagcgacaagcaccgagtgggatcaccaatacaataccgttcgtcgcgag
aacctctttcgcaaccccccgaaggatcacacggcctatcctgccctgcaagaggctgta
agccctcacatcgactccttcaatgccttgttcaccagcgacgacaagagcctcctcgct
cgaggcatagaggatattggcacaaagacatacctcgatggcgacgacagggctggcctc
gaaggcaagaaccgcctgtccgtacggataaagagtgtagcgttgcaaaagtcccagcta
cccccctccaataagttcgccagaaatcgtgaaattctgccctccgaatgtagagaacgc
cattcgacgtaccgaggcaggctatccgccacctttgagtacagggtcaatggtggtgat
ccgaaagaatttgtgcgcgagcttggacaggtgccaatcatggtcaagtccaacagatgc
cacttggagggcaactctccagctcaattggtgcagagaaaggaggaatccgaagaattg
ggcggctactttattgtcaacggtatcgagaagattatccgactgctgcaagtcaaccga
aggaatttccccatggcgatcaaccgaccgagtttccaaaaccgaggccaaggctacacc
ccgtacggtatcatcgtccgatcggtcaggcccgatgagacatctcagaccaacgttctg
cactacctgagcgacggcaacatgacgttccgcttctcctggaagaagaatgagtacctt
gtaccagtgatgatggtcctcaaggctctcgtcgacacaaacgaccgcgacatcttcgaa
ggactgattggtctctccaacacgaagtcggccaagaatagtttcttgacggaccgtgtc
gagctgctgcttcgaacttacaagtcatacggactctacagcaagaccgagacgagagcc
tacctgggagagaagttccgcgtggtgatgggtgtacctgacaccatgtccaactacgat
gttggcaccgagttcctacgcaaggttgtccttgttcaccttggtaacatcaacgtcacc
gagaaggaggacaacgataagttcaagatgctcttgttcatgattagaaagctgtatgct
ctcgtggcaggcgactgcgctgtcgacaaccctgatgctgtccaaaaccaggaagtcctt
cttggcggtttcctgtacggcatgattatcaaggagcgccttgaggagttcctgtcgact
gctgtcagattatctcttcgcgaatggaccagaaagcacccggccacgcccttcacatcg
caggacttcgccaaggagttccctgccaacatcttcagacacgccaacgagaaccttgga
aacggcctggaatattttctttccacaggtaacctgaccagtccctctggtcttgatttg
caacaaacagccggtttcaccgttgtagcggaaaagctcaacttcctccgtttcatcagt
cacttccgaatgatccacagaggtgccttctttgccgagttgaagacgactacggtccga
aagctgttgcccgagtcttggggtttcctgtgccccgtacacactcctgatggttcgcct
tgcggtttgcttaaccatctggctcacaagtgtaagatcatgaccgaatccgtcgacgcc
tccaagattcccggcctcgtagcagagttgggagctgtggagacgtcttctgcggctaca
gacgaaagcgttgtcatcatgcttgacggtaaactcatcggcttctgcacacctcgtgaa
tctctcagaatcgcagacactctccgtttctggaaggttgagggaactcacggtgtccct
cttcaactggaaattggatacgtccctccttcaaacggcggctcctatcctggtatctac
ttatcttctgcgcctgcgcggatggtcagacccgtgaagtatcttcctcttgataaggta
gacttcgtcgggccctacgagcaaccatacatgtccatcgccgttgttgagaacgaaatc
gtgtcaggcgagtcgacgcacgtggaggagaccccaaccaacatgctctccattcttgcc
aacatgacgcccttctcagacttcaaccagtcccccagaaacatgtaccaatgtcagatg
ggtaagcaaaccatgggaacaccggcaacggctcttcggcaccgaacggacaacaagatg
tacagaattcagagtggccagacaccggtcgtacgatcgcctctacacaacgcttatgga
ttcgacaacttccccaatggcttcaacgccgttgtagcggttatctcatacactggctat
gacatggacgacgccatgattctgaacaagtcggcacacgaaagaggattcggccacggt
actatctacaagacaaagaaggtctcgctgaaggaagaacagagaacgcgagccaccaaa
aacatcaccaagctcttcggtttcgcccccggcggttttgtcaaggggttctaccgtggc
ttgcttgatgaggatggattgccctacgttggacggatggtccaagaaggagatgtgctc
tgcgcatggcacacggtctcagcagactacagcggcaagctgatcaacctggatggacag
acacattacgaaaagtacaaggagtctgagactgcctttgtcgaggaagtacgtgtgctc
ggtagcgagtcgggcaatgagcctgcccagacgatctccatcaagctcagagttccccga
tccccggtcatcggtgacaagttctcttctcgtcacggacagaagggtgttgcttcccag
aaatggcccgctgtcgacatgcctttctccgagtctggtatccagcccgatatcatcatc
aaccctcacgctttcccttctcgtatgacaatcggtatgttcgtcgagtcactggctgga
aaggccggcgctctccacggattggcacaagactgcacgcccttcaagtttaatgaggag
aacaccgccggtgactactttggtcatcagctgatgaaggccgggtacaattaccatggc
aacgagcccatgtactctggtatcacgggagaggaactggccgccgacatttacgtcggt
gtcgtctactaccagcgtttgcgtcacatggtcaacgacaagtaccaagtgcgaacgacg
ggaccagtcgtgccgacaaccggccagcccatcaagggtagaaagcgtggtggtggtatt
cgtgtgggagagatggagcgtgacgcgctgctcgctcatggtacggccttcctgctgcag
gatcgtctgctcaactgttccgattacacgcgatcctggatctgccgaagctgtggttcg
ttcctctcagttcaaccaaccgtgtcaccatttgtgggtaagaagaagcaggtcacgaca
gtgcgttgcagaaactgcgcgacccgcctcgacgccggcgacgcggagagcgccgccaag
gtggagggagagatctgggaggacggccagggcaaccaatgggtcggaggcgagaacacg
acggttgtcgttgttccgggtgcgctcaagttcctggatgtggagttggcggctatgggt
gtcaagctgaagtaccgcatcgactccaaggacgcgcctcgcaagggccccttgaagccc
atgaaatcattaccttaa
DBGET
integrated database retrieval system
