Colletotrichum fioriniae: CFIO01_01430
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Entry
CFIO01_01430 CDS
T04796
Name
(GenBank) exosome complex subunit Rrp46
KO
K12590
exosome complex component RRP46
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFIO01_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_01430
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CFIO01_01430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
EXF83204
UniProt:
A0A010RY76
LinkDB
All DBs
AA seq
243 aa
AA seq
DB search
MTPNLNPQACISHLPRVDGSATFSRGGYCVVSAVNGPIEVQRRDENPFESVIDVVVRPAA
GVGGTGERQLENILRSALRQLIPVKNFPRCLIQVTLQVTETPQNDYANSKVVQAQSSLSL
LPALFHSAILALLSAAVPLKAIATCATLAVFEKGDKIIADPSRLEIDQSKSLHVVIFTSQ
NDLLLLESEGTFSMAEWDEVIDKGQSVCSQHRQTELGAAMHDDSQDAADMQQFIRTVMES
KAA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgactcccaacttgaacccccaggcctgcatctcacatttgccgcgagtagatggctcg
gcaacgttttcaaggggcggctattgcgtggtttcggccgtcaatgggccgattgaggtc
caacggcgagacgaaaaccccttcgaatcggtcattgatgttgtcgtacgacctgctgca
ggggtcggaggcacgggagaacgccaactcgagaacattttgcggtccgctcttcgccag
ctaattcccgtcaagaacttccctcggtgtctcattcaggtcacgcttcaggtgactgag
acgccgcagaatgactatgcaaacagcaaagtagtacaagctcagtctagtctgtccctg
ctaccggctctctttcacagcgccatcttggccttgctatcggctgctgtgcctttaaag
gctatcgccacgtgtgccactttggccgtcttcgagaagggtgacaagatcatcgctgac
ccgtctcgtctggagattgaccagtcaaaatcgcttcacgtggtcatcttcacgtcgcag
aacgacctgttgttgttggagagtgaggggactttctccatggccgagtgggatgaagtg
atcgacaaaggtcaatcagtgtgcagccagcaccgtcaaacggagctaggtgcggccatg
cacgacgacagccaagacgcggccgacatgcagcagtttatccggaccgtcatggaatcg
aaggctgcgtaa
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