KEGG   Colletotrichum fioriniae: CFIO01_01430
Entry
CFIO01_01430      CDS       T04796                                 
Name
(GenBank) exosome complex subunit Rrp46
  KO
K12590  exosome complex component RRP46
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CFIO01_01430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfj03019]
    CFIO01_01430
Messenger RNA biogenesis [BR:cfj03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CFIO01_01430
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: EXF83204
UniProt: A0A010RY76
LinkDB
AA seq 243 aa
MTPNLNPQACISHLPRVDGSATFSRGGYCVVSAVNGPIEVQRRDENPFESVIDVVVRPAA
GVGGTGERQLENILRSALRQLIPVKNFPRCLIQVTLQVTETPQNDYANSKVVQAQSSLSL
LPALFHSAILALLSAAVPLKAIATCATLAVFEKGDKIIADPSRLEIDQSKSLHVVIFTSQ
NDLLLLESEGTFSMAEWDEVIDKGQSVCSQHRQTELGAAMHDDSQDAADMQQFIRTVMES
KAA
NT seq 732 nt   +upstreamnt  +downstreamnt
atgactcccaacttgaacccccaggcctgcatctcacatttgccgcgagtagatggctcg
gcaacgttttcaaggggcggctattgcgtggtttcggccgtcaatgggccgattgaggtc
caacggcgagacgaaaaccccttcgaatcggtcattgatgttgtcgtacgacctgctgca
ggggtcggaggcacgggagaacgccaactcgagaacattttgcggtccgctcttcgccag
ctaattcccgtcaagaacttccctcggtgtctcattcaggtcacgcttcaggtgactgag
acgccgcagaatgactatgcaaacagcaaagtagtacaagctcagtctagtctgtccctg
ctaccggctctctttcacagcgccatcttggccttgctatcggctgctgtgcctttaaag
gctatcgccacgtgtgccactttggccgtcttcgagaagggtgacaagatcatcgctgac
ccgtctcgtctggagattgaccagtcaaaatcgcttcacgtggtcatcttcacgtcgcag
aacgacctgttgttgttggagagtgaggggactttctccatggccgagtgggatgaagtg
atcgacaaaggtcaatcagtgtgcagccagcaccgtcaaacggagctaggtgcggccatg
cacgacgacagccaagacgcggccgacatgcagcagtttatccggaccgtcatggaatcg
aaggctgcgtaa

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