Colletotrichum fioriniae: CFIO01_01871
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Entry
CFIO01_01871 CDS
T04796
Name
(GenBank) S1 RNA binding domain-containing protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfj03009
]
CFIO01_01871
Ribosome biogenesis [BR:
cfj03009
]
Eukaryotic type
90S particles
Other 90S particles
CFIO01_01871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
TPR_19
HAT_Syf1_CNRKL1_C
Suf
AEP1
Motif
Other DBs
NCBI-ProteinID:
EXF82411
UniProt:
A0A010RPS2
LinkDB
All DBs
AA seq
1774 aa
AA seq
DB search
MSSLKRKDAPGGTPPSKAAKASKVSRPSKRDTPSKDKKDKKTTEDAPAPRAPAVSALLKD
DEPLFPRGGGSVLTPLEQKQITMEAKADAAKEEAELFDTNVKGKAKKEKRRKAKDTKDTK
PARDEDAVKIEGLNFKRLVKGSLVLGQISHIDPVQLTIALPNNLTGTVSIAAISDTINNK
LEKDAADESEDEEEDEDDEGIDLKSMFKVGQYVRAHVLSTADESGTGKPKRRIELSLRSA
DANTGISSDEVVGYTTLMASVTSVQDHGYEMDLGIEGDLKGFLAKKEVGPDMDEASLRPG
AVCLCVVKAVTGIIVQLSTDPLKLGNTSLVASSAPTINSFLPGSLADVLLTEVTSRGLQG
KLLGHLPVTADLIHSGVGPDGVDLEAKYKVGSRVKARIICNFPAAREPKLGMSLLPHIVS
LQPKSSGKGSRAKAPLDLLPIASFVEECTVRHVEPEIGLYVDTGVPGISGFVHISRVKDG
KVDALYEGSGPHKVGSTHRGRVIGYSPLDAMFLLSFEQTILDQPFIRLEDVPVGEVVSGK
IEKVIIGENGISGLIVKLAEGISGYVHESHFADVKLQHPEKKFREGATVKARVLSVRPRK
RQLRLTLKKTLVNSDAPIIKNLEEVEVGLQTPGTITEIGSAGAQLEFFGGVRGFLPVSQM
SEAYIKDPRDHFRTGQVVSVHVLSVTPEDRRMIVSCKDPSAFGLDKQAALKALKVGDIVS
AKVSQKTEDEVYVDLEESGLKAIIRTGHLSDKSASKTQAALKRINVGNTLTDLMVLDKNE
LRRAVILTQKPSFIEASKNGKLLTSVEDATPGAVAPAYVREIGPHAVYVQFGGNVTAILP
KSKLPKDVQDKEAFGMRKHQSIEVKIVSSNPEQNRIIAAPASADETAPTVSETAVNSVDD
SIKTVDDVALGTILNAQVMSVKNTQLNVRVADNIQGRIDVSQFFDKWEDITNRKNPLQKV
KANEIIRVRAIGIHDSKNYRFLPFSHRSTHSVIEFSAKKGDLETEEVELLSYDTIKVGSS
HVAFVNNHGKNCLWVNISPTVRGRIGIMDVSDDLSHAGNLEKHFPIGSALKVRVISVDAE
KGHLDLSARSSTGSTEVTWESLKKNVALPGRVTKINDRSVMIKLSESVSGPVHLVDLCDD
YDQANTLKYNKGEIVRVSVVEVDKTDKRLRLSTRPSRILSSTSPVADREITRVSQIASGD
IIRGFVKNVTDKGVFVQLGGNVSALVKIGNLSDRYIKDWKGNFQVDQLVKGRVINVDAAT
SQVELSLKASVVENDYTPPVTYKDVKEGQIVTGKVRKVEEFGAFIVVDNSLNVSGLCHRS
QMAEKPVEDARKLYNEGDLVKAKILSVDEEKRRITFGLKPSYFDEDSDMEDVDGGADLES
DEDSDVEMGDGGAQLTISGTDNYEESDEEDEEYEDGDEEEDEDSDVDMDEDAAASKGLGS
GKYDWTGDAFDDSENESKVKSKKSKTTEKKEKKKGGEIQIDRTADLDAHGPQTATDYERL
LLGQPDSSQLWIEYMALQMKVSELSKARETAERAIKTINIREQTEKLNVWIAYLNLEVAY
GTKASTEEVFKRACQYNDEQEVHERLASIYIQSGKLKQADDVFQSLVAKFKSKSPKVWEN
YAHFLHVTMNEPDRARALLPRATQALEERHTAQLMASFGALEFKSPNGDAERGRTTFETI
LATWPKRFDLWNQLADLEIAAAEPDATAIRDVFERGTKAKGLKPKKAMKWFKRWANWEEK
TSPKGRDKVMAKAQEWVAAAKAKKGAAAEEDDEE
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgagctctctcaagcgaaaggatgcccccgggggtactcctccatcaaaagcggcaaag
gcctccaaggtgtcccggccctcgaagcgcgatacgcctagcaaagacaagaaagacaag
aagacgactgaagatgctcctgcgccccgggctcccgcagtctcagcgctgctcaaagac
gacgagcctttgttcccccgtggaggcggcagcgttctcacgcctctcgagcagaagcag
attaccatggaagcaaaggcagatgccgcaaaggaagaggccgaattgttcgacacgaat
gtgaagggaaaggcaaagaaggagaagaggaggaaagcaaaagataccaaggatacgaag
cctgcaagagatgaggatgcagtcaagattgagggtctcaacttcaagcgattggtgaag
ggctctttggtgcttggtcagattagccacatcgacccggtccaactaacgattgcgctg
ccaaacaaccttacaggaactgtttcgatcgctgcgatctcggacacgatcaataacaag
ctcgagaaagacgccgccgacgaaagcgaagacgaagaggaggacgaagatgacgagggc
attgatctgaagtccatgttcaaggtcggccagtacgttcgcgcacatgttctgtcgacc
gcggacgagtctggcaccggcaagcctaagcgccgtatcgaactttccctccggtctgcc
gacgccaacactggcatttccagtgacgaggtcgtcggatacacaaccctcatggcgtca
gtcaccagcgtccaggatcacggttacgagatggacttgggtattgagggcgacttgaag
ggtttcctagccaagaaggaagtcggacccgacatggatgaggccagcttgcgaccaggc
gccgtctgcctctgcgtcgtgaaggccgtgacaggcatcattgtccagctgtcgactgat
cctctgaagctgggcaacacctccctcgtggcgtcgagcgctccgacaatcaactccttc
ttgcctggttccttggccgacgttttgctcaccgaggtgaccagcagaggtctgcaggga
aagctgcttggccacttgccggtaaccgcggatttgattcactcaggtgttggtcccgat
ggtgttgacttggaagccaagtacaaagtaggcagccgtgtcaaggcgagaatcatttgc
aacttcccggctgcgcgagagcccaagctcggtatgtctctgctaccgcatatcgtctct
ttgcagcccaagtcatccggcaaaggcagcagagccaaggctcctcttgacctgctcccc
atcgcttcatttgtggaggagtgtactgtgcgccatgtcgagcctgagatcggtctctac
gtcgacactggcgttcctggtatctccggttttgttcacatttctcgcgtgaaggacggc
aaagtcgacgcactgtacgaaggcagtggccctcacaaggttggctcaacacaccgcgga
agagtcatcggctacagccctctggatgccatgttcctgctgtcatttgagcagaccatc
cttgaccagccctttatccgcctcgaggatgttcccgttggagaagtcgtttctggaaag
atcgaaaaggtcattatcggcgagaacggcatcagtggcttgatcgtgaagctggccgag
ggcatcagtggttacgtacatgaatcacatttcgccgatgtcaagctccagcaccccgag
aaaaagttcagagagggggccaccgtcaaggcgagagtgctctcggtgcgtccgcgaaag
cgccagctccgccttaccttgaagaagactttggtcaactcagatgcgccaatcatcaag
aacctcgaggaggtcgaggttggtctgcaaactccgggaacaatcactgagatcggctct
gccggtgctcagctcgagttctttggcggtgtcagaggattcctgccagtgtcacagatg
agcgaggcctacatcaaggaccctagagatcacttccgtaccggccaggttgttagcgtt
cacgtcctcagcgtgacccccgaggaccgcaggatgattgtgtcatgcaaggacccttcg
gctttcggtctcgacaagcaggccgcgctcaaggcactaaaggttggcgacatcgtctct
gccaaggtcagtcagaagacggaagatgaggtctacgttgatcttgaggagagtggtctc
aaagccatcatccgcactggccacctctcggataagtctgctagcaagactcaggccgct
ctcaagcgcatcaatgtcggcaacactctcacggatctcatggtcttggacaagaacgag
ctcagacgtgctgtcatccttacccagaagcccagcttcattgaagccagtaagaacggc
aaacttctgacaagcgtcgaggatgcgactcctggtgccgttgcgcccgcctacgtccgg
gagattggccctcatgctgtttacgttcagtttggtggcaatgtcaccgccatcctcccc
aagagcaagttgccaaaggatgtgcaagacaaggaggcattcggcatgcgcaagcaccag
agcatcgaggttaagattgtgtcttccaaccctgagcagaaccgcatcattgctgcgcca
gcctcggcggatgagactgcccccaccgtatcagagaccgccgtgaactctgtcgacgac
agcatcaagacagtcgacgacgtcgcactcggcactattctcaatgcccaggtcatgtcc
gtcaagaacacgcagctgaacgtcagggttgccgacaacattcagggccgtatcgacgtt
tcacagttcttcgacaagtgggaggacatcaccaaccgcaagaaccccctgcagaaggtc
aaggcgaacgagatcatccgcgtgcgtgctatcggcattcatgactccaagaactaccgc
ttcctgcctttctcccaccgctccacacactccgtcatcgaattttccgccaagaagggc
gacctagagaccgaggaagttgaacttctttcctacgacacaatcaaggttggctcttcc
cacgtcgcctttgtcaacaaccacggcaagaactgcttgtgggtcaacatctcacccact
gtccgcggtagaatcggtatcatggacgtttctgacgacctatctcacgctggcaatctc
gagaagcacttccccattggctctgctctcaaggttcgtgtgatctcggtcgatgctgag
aagggacatctggacctgtcagctcgatcatccaccggctctaccgaggtcacttgggaa
tccctcaagaagaacgtggccctccccggcagagtgactaagatcaacgaccgctccgtc
atgatcaagcttagcgagtctgtttctggaccggttcacttggtcgatctttgcgatgac
tacgaccaagccaacactctcaagtacaacaagggcgaaatcgtccgcgtctccgtggtg
gaggtcgacaagaccgacaagagactgagattgtcaaccagaccctcccgcattcttagc
tccacatcgcctgtcgcggatcgcgaaatcaccagggtgtctcagattgcctctggagac
attatccgtggttttgtaaagaacgtgactgacaagggtgtatttgtgcaacttggcgga
aacgtctctgctttggtcaagattggcaacttgtctgatcgttacatcaaggactggaag
ggcaacttccaagttgatcaactagtgaagggccgagtgatcaatgtcgacgctgctacc
agccaagtcgagcttagtctcaaggcctccgtggttgagaacgactacacgccacctgtg
acgtacaaggacgttaaggagggccagatcgtcaccggaaaagtacgcaaggtcgaagaa
tttggtgcattcattgtggtcgacaactctctcaacgtcagtggcctgtgccatcgcagt
cagatggcagagaagcctgttgaggatgcccgcaagctttacaatgagggtgatttggtc
aaggccaagattctctcggtagatgaggagaagagacgcatcacattcggcctcaagcct
agctatttcgacgaggacagcgatatggaggacgtcgacggcggtgcggatctcgagagc
gatgaggattctgatgttgagatgggagacggcggcgctcaactcaccatcagcggtacc
gacaattacgaggagtctgatgaagaagacgaagagtacgaagacggtgacgaagaggag
gatgaggatagcgatgtggatatggacgaagatgcagcggctagcaagggtctcggctcc
ggcaagtacgactggactggcgacgcgtttgacgattcagaaaacgagtcaaaggtcaaa
tcaaagaagtcaaagacgacagaaaagaaggagaagaagaagggtggcgagatccagatt
gatcgtacagccgatcttgatgcccacggaccgcaaaccgccaccgactacgagcgtctc
ctgctgggtcagcccgactcatcccagctgtggatcgaatacatggccttgcagatgaaa
gtcagcgagctgtccaaggctcgcgagactgccgaacgtgccatcaagacgatcaacatc
cgggaacagaccgagaagctcaacgtctggatcgcctacctcaacttggaggttgcttac
ggcaccaaggcgtccaccgaggaggtcttcaagcgcgcctgtcagtacaacgacgagcag
gaggttcacgagcgtctggccagcatctacatccagtccggaaagctcaagcaagcggat
gatgtcttccaatcactggtggccaagttcaaatcaaagtcaccaaaggtctgggagaat
tacgcccatttccttcacgtgacgatgaacgagcccgaccgcgcgcgtgccctcctgccc
cgcgcgacccaagccctcgaggagcgtcacacagcgcagctgatggcctccttcggcgcc
ctcgagttcaagtcgcccaacggggatgcggagcgcggccgcacaacgttcgagacgatt
ctcgcgacgtggccgaagcggtttgacctgtggaaccagctggcggacctcgagatcgcg
gccgccgagccggacgccacggcgatccgggacgtgtttgagaggggcaccaaggccaag
ggcctgaagcccaagaaggcaatgaagtggttcaagaggtgggccaactgggaggagaag
accagccccaagggccgggacaaggtgatggccaaggctcaggagtgggttgccgcggcg
aaggccaagaagggggctgctgccgaggaggacgatgaggagtga
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