Colletotrichum fioriniae: CFIO01_02325
Help
Entry
CFIO01_02325 CDS
T04796
Name
(GenBank) WD repeat domain-containing protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03420
Nucleotide excision repair
cfj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CFIO01_02325
09124 Replication and repair
03420 Nucleotide excision repair
CFIO01_02325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfj04121
]
CFIO01_02325
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_02325
Ubiquitin system [BR:
cfj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CFIO01_02325
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
CFIO01_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
WD40_RFWD3
NBCH_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WD_LRWD1
Hira
RNB
Motif
Other DBs
NCBI-ProteinID:
EXF84789
UniProt:
A0A010S2E8
LinkDB
All DBs
AA seq
478 aa
AA seq
DB search
MQSRLFARSIGELSPDGFAQATASGLVRSFAAAPQHRFDGEGAEPEEEGRHVNLWAHRIG
VNALALDKFDGRLLLSGGADGSVKLWDLHQESSPHKSHIFQPIANIARSIGDETNTHKHG
ITHLDFYPFDNEAFLSSSFDRSLKLWSTQRMTLSANFDLNANIYTHATSPIANHLLVACA
TQHSSVRLIDLRSGTSIRSLVAHGGAVLSAAWSPRQEHALATGHVDGKVRVWDIRRASGL
VGQLDQEDSLGILHRFDHAMASGLDWKRMPHFRNSARAHNEGVNGLTWTDDGKYIVSAGL
DCRIRVWDAATGANTLASFGSLIQNQQPKTVNMFVTPARLTPSRRDLLFYPNEQEILVMD
LHEGTLVTRLRVPGPHSAAVYQNNGLNVKNRTMSMVWRGSGGSGLQKGPIMGGGSSFGAV
YTAHLDGQIRAWMPRLPGPEDDDDTPDPQDANEEERSRKRKALDDAFRSLMGKQITFS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcccgtttgtttgcccgctcaataggtgagctgagcccggacggctttgcgcaa
gcgaccgcctcgggactcgtccgatcctttgcagccgctccacagcaccggtttgacgga
gaaggtgccgagcccgaagaagagggccgacatgtgaatctttgggctcaccgcattggt
gtcaacgcactggccttggacaagtttgatggtcgtttacttctttctggcggtgcagac
ggatctgtgaagctctgggaccttcaccaagagagcagccctcacaaatctcacatcttt
cagcccattgccaatattgcccgttctattggggatgagacaaacactcacaagcacggc
attactcatcttgacttctaccctttcgacaatgaggcctttctctccagttcctttgac
cgctcactcaagctatggtctactcaacgcatgactctatccgccaatttcgacctgaat
gccaatatctacactcatgccaccagccccatcgccaatcatctcttggtcgcttgcgcg
acccagcactcatctgttcgcttgatcgacctcaggtcagggacgtcgattcgctcgctg
gtagcacatgggggcgctgttttatcggcagcttggagtcctcgtcaggagcatgctctt
gcaaccggacatgtcgacgggaaagtccgcgtctgggacatacggcgcgcctctggatta
gtcggccagcttgatcaggaggatagccttggtattctacaccgcttcgaccatgccatg
gcttctggccttgattggaaacgcatgcctcatttccgcaactcagctcgagcccacaat
gagggtgttaacggcttaacctggaccgacgatggcaagtacatcgtctcagccggcttg
gattgtcgaattcgtgtgtgggatgctgccactggcgcgaatacgctagctagttttggc
tccttgatacagaatcaacagccaaagaccgtcaacatgtttgtgacgcccgctcgattg
accccatcacgtcgggatcttctgttttaccccaacgagcaagagatcctggtcatggac
ctacacgagggcaccttggtaacgcgtctacgagttcctggacctcactcagcggccgta
tatcagaacaatggcttaaatgtcaagaatcgcacgatgagtatggtgtggcgtggcagt
ggtggttccggtttgcaaaaggggcctataatgggaggcgggagctcttttggtgccgtt
tatacggctcacttggacggtcagatacgtgcctggatgccccggctgcctggacctgaa
gacgacgatgataccccggatcctcaggacgccaatgaggaggaaagaagccgcaagcgc
aaggcactagatgacgcctttaggagtctcatgggcaagcagatcacgtttagttga
DBGET
integrated database retrieval system
