Colletotrichum fioriniae: CFIO01_02452
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Entry
CFIO01_02452 CDS
T04796
Name
(GenBank) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03013
Nucleocytoplasmic transport
cfj03015
mRNA surveillance pathway
cfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CFIO01_02452
09122 Translation
03013 Nucleocytoplasmic transport
CFIO01_02452
03015 mRNA surveillance pathway
CFIO01_02452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_02452
03041 Spliceosome [BR:
cfj03041
]
CFIO01_02452
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
CFIO01_02452
Spliceosome [BR:
cfj03041
]
Common components
Common spliceosomal components
Cap binding complex
CFIO01_02452
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
Motif
Other DBs
NCBI-ProteinID:
EXF73682
UniProt:
A0A010Q1H3
LinkDB
All DBs
AA seq
807 aa
AA seq
DB search
MGDYERRRYHGGGGGGGGGGGGGGYNNRKRRYRDDDDNDHRQSRRRIDTAPLPVRVRRQL
LSLAESPLRRWHEEVQGIAHVVAENAEDAELRESFVSLVLQLSLEQPLKTPFVAGVVLLV
NTLKPEIVDEVLTKLSAATQEKIQAGEWRDVKLYLKLLACLQSSLDGEGIFPVLEELFGR
AVDLQTASSDDTIGTELVKIILLTIPYIMSAAPDQWLQKAADLMDKTEIIASEPHALQVL
IDPYLPEKQDQPTGSMSFIGMLQKQLQHEAANGWELSCLPRPWKLPLEEIEAQEKLDNAT
KHTLPTITVPEKIVAGSRPLFPEVYYSVYSTQDVESVPPVTDIAASLVRDGLVDTINILD
FNRNVTARYLIDLDCYFSDSTFVKRATPFDRLRDVETGRSTWKPEDVAVDAVFSQLFQLP
LPEHKLVYYHSVLTEACKIAPAAIAPSLGRAIRHMYRNSSRIDLELSQRFVDWFSHHLSN
FGFTWKWTEWVDDVYLPDLHPQKAFIIGALDKEIRLSFAQRIKGTLPEPYQPLIGPEKEK
DVPDFKFSDESTPFSAEGREIAALLRRKAPDEEFQPIIERIHSLAIERTLDPLVTSTDVF
VTAVCWVGSKSLSHVLACIERTKDRLLDVGAASEAAKSQIITAVMSYWAAQPGVAISIVE
KLLNYSILLPISVIEWALSGGSHVQGQSSGDSLAQPHVFELVFGTVSKVTGRVRQLLAKE
AEADEDLKERDTKAMRDLFKAMEDALVSWASGSKDEMMEEMDGAGQRDALLRRWGERWLR
VFRRRSAIEEAFILEASKEQVALDNAV
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgggcgactacgagagaagacgttaccatggtggtggcggcggtggtggtggcggcggt
ggtggtggaggctacaacaacaggaagagaaggtatcgagacgacgatgacaatgaccac
cgacagtcgcgacgaaggatcgataccgcaccccttcctgtgagagtgcgtagacaactc
ctctctctcgccgaatccccgctgcgacgctggcatgaagaggtccaaggcatcgcgcac
gtcgtcgccgaaaacgcagaggacgccgagctacgcgagagcttcgtcagtctcgtctta
cagctttcgctagaacaaccgctcaagacaccgttcgtcgctggtgtggttctactcgtg
aacacgctcaagcccgagattgtggatgaggttctcaccaagctgagcgccgcgactcaa
gagaagatccaagcgggtgaatggagggatgtgaagctatatctcaagttgcttgcgtgc
ctacaaagctctctggacggcgagggaattttccccgtcctcgaggagctatttggccga
gcggtagacttgcaaaccgcgagttctgatgacacgattggcaccgagcttgtgaagatc
attcttctcacaattccgtacatcatgtcagcagcgcccgatcagtggctccaaaaagcc
gccgacctgatggacaagaccgaaattattgcctcggagcctcacgccctgcaagttcta
atcgatccgtaccttcccgagaagcaagaccaacctaccgggtccatgagcttcatcggc
atgcttcaaaagcaactgcagcatgaagcggccaacggatgggagttatcttgcctgcct
aggccctggaagctgcccctagaggagatcgaagcacaagagaagctggacaatgctaca
aagcataccctccccaccatcacagtacccgagaaaattgtcgctggatcaagaccgcta
ttccctgaagtctactattcagtttatagcactcaggacgtcgaatctgtcccgcctgtc
acggatattgcagcgtcattggtcagagatggcttggttgatacgatcaacattctcgac
ttcaaccgcaacgttactgcgcggtatcttattgacctggactgctatttctcagactca
actttcgtcaagcgtgcaaccccctttgacagacttcgagacgtcgaaactggccgctca
acgtggaagcccgaggatgtggctgtagatgccgtgttttcacaactcttccagcttcca
ctcccggaacacaagcttgtttactaccactcagtcctcaccgaggcctgcaagattgcg
cctgcggcaattgctcccagcttgggtcgagcaatccggcacatgtaccgcaactctagc
cgaatcgacctggagctctctcagaggtttgttgactggttctcgcatcatttgagcaac
ttcggcttcacctggaagtggacggagtgggtagatgacgtgtatctgcctgaccttcac
cctcagaaggcattcattattggcgctttggacaaggagatccggctcagtttcgctcag
cgtatcaagggaacactgcccgagccataccagcccctgattgggcctgaaaaggaaaag
gatgttccagacttcaagttcagtgacgaaagtacacctttttccgcagagggtcgcgag
atcgctgctctgctgagacgcaaagcacctgacgaagagttccagccgattatcgaacga
atccactcacttgcgatagagcgcactctggatcctttggtgacgagtaccgatgtcttt
gtcacggccgtgtgctgggttgggtccaagtcgctcagccacgtgctcgcgtgtattgag
cgtaccaaggatcgtctgctcgacgttggcgcggcatctgaggcggctaagtcccaaatc
atcaccgcggttatgtcgtactgggcggcgcagcccggtgttgcaatctccatcgtcgaa
aagcttttgaactactcaatccttttgcccatttctgtcattgagtgggctctctccgga
ggcagccacgtgcaaggacaatcttcgggcgattctttggcgcagcctcacgtctttgag
ctggtgtttggtaccgtgtccaaggtgactggccgcgtcagacaacttctggccaaggag
gccgaggccgacgaggatttgaaggagagagacaccaaggcgatgcgcgatctcttcaaa
gcgatggaggatgcgctggttagctgggcttcaggcagcaaggacgagatgatggaggag
atggacggagccggtcaacgcgatgccctacttcgccgctggggtgagcgttggctaagg
gtgttccgccgaaggtccgccattgaggaggccttcattttagaggcgagcaaggagcaa
gttgctcttgacaacgccgtctga
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integrated database retrieval system