Colletotrichum fioriniae: CFIO01_03009
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Entry
CFIO01_03009 CDS
T04796
Name
(GenBank) replication factor C
KO
K10755
replication factor C subunit 2/4
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03030
DNA replication
cfj03410
Base excision repair
cfj03420
Nucleotide excision repair
cfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFIO01_03009
03410 Base excision repair
CFIO01_03009
03420 Nucleotide excision repair
CFIO01_03009
03430 Mismatch repair
CFIO01_03009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfj03032
]
CFIO01_03009
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_03009
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_03009
DNA replication proteins [BR:
cfj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CFIO01_03009
DNA Replication Termination Factors
ELG1-RFC complex
CFIO01_03009
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CFIO01_03009
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CFIO01_03009
Check point factors
HRAD17(Rad24)-RFC complex
CFIO01_03009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
RuvB_N
AAA_22
AAA_11
AAA_16
AAA_assoc_2
Mg_chelatase
AAA_28
SLFN-g3_helicase
AAA_14
AAA_19
AAA_5
DUF815
AAA_7
DNAX_ATPase_lid
AAA_24
ResIII
AAA_30
AAA_2
AAA_23
bpMoxR
Gp44_lid
RNA_helicase
nSTAND3
AAA_3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
EXF81550
UniProt:
A0A010QYA1
LinkDB
All DBs
AA seq
382 aa
AA seq
DB search
MASFFDLKARKAAAANGTSTQKQEKSAQPPRAQPWVEKYRPKTLSDVTAQDHTVTVLQRT
LQASNLPHMLFYGPPGTGKTSTVLALAKELYGPEMIKSRVLELNASDERGISIVREKVKD
FARMQLTNPTNEYKKRYPCPPFKIIILDEADSMTQDAQSALRRTMETYSKITRFCLICNY
VTRIIDPLASRCSKFRFKSLDQTNTKKRLEDISENEGVQLEDGAVDALIKCSEGDLRKAI
TFLQSAARLVGAGDKDAAGADAMDVDKKPVTVKIVEDIAGVIPDKTIDTLVSAIRPQGAA
DTYAGVAKVVEDMVADGWSAGQVVTQLYQALVFDETIPDVQKNKIVLIFSEVDKRLVDGA
DEHLSILDLALRISGVMSGRGN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctttttcgacctgaaggccaggaaggccgccgcagcaaacggcacgtcgacc
cagaaacaagagaaatctgcgcaaccgccacgagcacagccatgggtcgagaaataccgt
cccaagactctcagcgatgtcacagcacaagaccacaccgtcaccgttttgcagaggacg
ctgcaagcctccaacttgccgcacatgctcttctacggcccaccaggcacaggaaagacc
tctacagtattagctttggccaaagaactctacggtcccgagatgatcaaatcgcgtgtg
ctcgagctcaatgcttccgacgagcgtggaatttccatcgtccgagagaaggtgaaggac
tttgctcgcatgcagttgacgaacccgacgaacgaatacaagaaaagatacccttgcccg
ccattcaagattatcatcttggatgaggccgactccatgacccaagatgcacagagtgcc
ttgcgccgcaccatggagacatacagcaaaatcacacgattctgcctgatttgcaactac
gtcacgcgaatcattgatccccttgctagtcgttgcagcaagttccgcttcaagagctta
gaccagactaacacgaagaagagactggaggatatctcagaaaacgagggcgtacagctg
gaggacggcgcagtggacgccctcatcaagtgcagtgagggtgatctgagaaaggccatc
acattcctgcagagtgctgcgcgactagtgggcgcgggcgacaaagatgccgcgggggct
gatgctatggatgtcgacaagaagcccgtcacggtaaagattgttgaagatatcgctggt
gtcattcctgacaaaactatcgacacattagtctctgccattcgcccacaaggcgctgca
gacacatacgcaggggtggccaaggtcgtcgaggacatggtggcagatggctggagtgct
ggccaggttgttactcagctctaccaagcactcgtctttgacgagacgatcccagatgta
cagaagaacaagatcgttctcatcttttccgaagtcgacaaaagacttgtggatggcgcg
gatgagcatctgtctatcctcgatttggccttgaggatatcgggggttatgagcggtcgt
ggcaactga
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