Colletotrichum fioriniae: CFIO01_03026
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Entry
CFIO01_03026 CDS
T04796
Name
(GenBank) RNA binding protein
KO
K12881
THO complex subunit 4
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03013
Nucleocytoplasmic transport
cfj03015
mRNA surveillance pathway
cfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CFIO01_03026
09122 Translation
03013 Nucleocytoplasmic transport
CFIO01_03026
03015 mRNA surveillance pathway
CFIO01_03026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_03026
03041 Spliceosome [BR:
cfj03041
]
CFIO01_03026
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CFIO01_03026
TREX complex
CFIO01_03026
Spliceosome [BR:
cfj03041
]
Complex C
Other components
EJC/TREX
CFIO01_03026
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CFIO01_03026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-ProteinID:
EXF81567
UniProt:
A0A010QN97
LinkDB
All DBs
AA seq
354 aa
AA seq
DB search
MADKLDRSLDEILGEKQLQKSDGPRNNRGNGRGAPRRRERERQEYPRDGVRKGQANRCRR
PAIQSFRDEPRNLDSEWVHDRFEEHDNRRAPAPRRRRDEPEQRQVRDSSSSKIRVENIHY
ELTPEDLEELFNRIGPVAKLDLKYDRAGRSEGVAFVTMESREDALDAIKQFDGANANGQP
IKLSIMGGGAGGRSRNPFDSAVMPGRPLAERISAPGGRSRSMSPGRRYDVDEAAERGIDR
YVPGNRGNRSRSPMPRRRGNGGGGGGGGRRPGARREGGRDGGRDGGRDGGRDQEGGRGGR
SGRDGRTRKTQEELDAEMADYFGGGNSGETAPQPNGGAAAAAVPAANDDIDMIE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagctggaccgcagccttgacgagatcctcggcgagaagcaattgcagaag
agcgacggccctcgcaacaaccgtggaaacggtagaggtgccccccgaagacgcgaacgc
gaacgccaggaataccctcgcgacggcgttagaaagggccaagctaacaggtgtcgccgt
cctgcgatacagtccttccgtgacgagcctagaaacctcgatagcgaatgggttcacgat
cgattcgaggagcacgacaaccgccgtgcgccggcccctcgacggagacgcgatgagcct
gaacaaaggcaagttcgggattccagcagctcgaaaatccgcgtcgagaacatccactac
gagctgactcctgaagacttggaagaattgtttaacagaattggccctgtcgcgaagttg
gacctcaagtatgatcgcgctggtcgctcggagggcgttgccttcgttacgatggagtcc
cgcgaggatgctttggacgccattaagcagtttgacggtgctaatgctaacggccaaccg
atcaagctgtcaatcatgggtggtggagctggcggtcgatctcgcaacccctttgactcg
gcggtgatgccgggccgtccacttgcagagcgaatctctgctcccggcggtcggtcgaga
tccatgtctcctggacgaagatacgatgtcgacgaggctgctgagagaggcattgacaga
tacgttccaggaaaccgcggaaaccgttcgcgaagccctatgccccgccggcgcggaaac
ggtggcggtggcggtggcggcggacgcagacccggcgctcgcagagagggcggtagagac
ggtggaagagacggtggtagagatggcggcagagaccaggaaggtggaagaggtggccgc
tcgggtagagacggccgtactcggaagacccaggaggaactggatgccgagatggctgac
tactttggcggaggaaactccggagagactgcgcctcagccgaatggtggcgctgccgct
gccgcggtacccgccgcgaacgacgatatcgatatgatcgagtag
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