Colletotrichum fioriniae: CFIO01_03084
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Entry
CFIO01_03084 CDS
T04796
Name
(GenBank) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03013
Nucleocytoplasmic transport
cfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CFIO01_03084
09122 Translation
03013 Nucleocytoplasmic transport
CFIO01_03084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_03084
03041 Spliceosome [BR:
cfj03041
]
CFIO01_03084
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CFIO01_03084
Spliceosome [BR:
cfj03041
]
Complex C
Other components
EJC/TREX
CFIO01_03084
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CFIO01_03084
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-ProteinID:
EXF77763
UniProt:
A0A010RZQ9
LinkDB
All DBs
AA seq
2433 aa
AA seq
DB search
MPPKRKARGGPAGEGGRPSPHRPGDMPLGQRERDFSEGGGRGGRGGRNTRRNDRRDSAQG
QSSQPGTQSASASRVTSPTVPRPPSTPSQPQHPAPIATGPPSAPISHPPSPVPTSYCYEH
LTDEAITSWETGSRQKLVTHGVDSRSDVDIEELAAIYQEFIHAVIEGRLSPVDAGACMKE
ILGSESQEMIKESFSFEPHTLFLDTLSIIFDNDRGLFRPQLRDFIQATGVSSELVRQTLD
AQLLQDLGMIRETFVKLGIRRATNLLYRQANYNLLREESEGYSKLMTELFTTSSSEPPSA
ETAHAAFERLKGLIGTFDLDVGRVLDVTLDVFAAVLIKQFRFFIKLLRVSSWWPSNQNPA
SSTYAGGLPPWALPESSHWMTSQEVELESAELRRQRDIEFWDRAREVHLDAFFQLGGRQV
TGNHLKLLEESESASEAEVNAASAWMKLTKTLPPQGNRTAAQLLGFKLRFYASDARDPDD
VLPANLLYLVALLVKVGFMSLVDIYPHLWPLDEEMDTMREKKMKELDEKERQSRPGAAQN
ALLMAGALPDDSAPPPTTRTRAVAGKADAESKTDAAADEKEKLPEPMEQKAALLICLLTI
GAIPESLFILGRFPWLPEAYPEVLERIHRILNYSVEKVYQESRPIPVGSAEPTSKPIADI
DQSGVPKGSVKLSTLPPKKSMRWPFPDGFDGRDQHYKFYWDEWADNVPVCQTVEDIFTLC
DTFLNLSGVSIGKDPALLAKFVSIGAKSLAEDRSQHNMDRWQDLLRRILVPALSMTNANA
AIVNSVWDLLKLYPVTTRYSIYAEWFEGQISRLPAMKAAFTRTRVETRGVMKRISLTNLS
EMAKSLAKTSYSSPGIVFKEALGQIEAYANLIEAFVECAKYFTDLAYDVLIWSLVSSMGG
KRSRTQESSILLTSKWLQALSKFAGKVFKRYSILDSTPILQYVNDQLFQGNSTDLIILKE
LVSSMGGVVQVLDFTDDQILAMSGGEVLRRQTLLSLQDKRFESTRSAKRLMQSLGDSKLA
GRLLINVAQYRQAAIYKLPDDEAHIKYIGSVIDDSHQILVQYLDLLRTNLEPHEFEALVP
AITILMDEFGLDASLAFLIGREGVAYDMFTKKQDSAIAIDSDGDLSMSQDATEAKEATGE
STEAEDKKPTLAEVREKAKKDAGRQIHEALDPIVTSMKSITPGTSWTKLSPEFYVLFWAL
QLGDIEVPAASYNNAHKRLSNLKKELDRDRSDMSRSGINKKEAKKAELLKISNELPKEAD
LQMKRARVVRDYMTDHMGTWFTGSTEKLNGLSDAILEQCLLPRLVLSASDAEYCYVFIKK
LHMLGAPTFRLKALYDRLFCVNRLRAMIFTCTVREAEHLGRFLNCILKDLARWHRDTNAY
DREAVGKRSFFLGFATEFDDKGLPSSYYDHAQFRDILYGWHSKLNLALKSCLAGMEWMHI
RNAMTILKAVLDHFPAITFMGTQFIDQLKTITDREAASKTASAGEEGHRVDLSVAAQGAL
SELQRRKDKWIIPAGFRPNMNGGKAKDESTSTSLRPTATEFQPRSARTAAEQEDGEVKDG
EVKEGKDAGSRSAAPSAPATLAQKDPNLPPKPSASQADTAKGGFPRGDIGSTTSSKPPTP
KPANATPLPNNMNHRDVPRSTPTPTGPDRSAHNLPKRPDVPIPGHYGRTHFTPDALPDRV
REPRDAREPRGPRDTREPRDTRDHRDPREPSREPRFAEPSRPDRSRDFSGQDRRGPDAPP
REPGRLSEKDWPSRPDSLPPRRDHGPHEREGRPSRDRVPPTNGRVSESGRLSREPAVATP
PSQPTQKPAEDPPVNPARLALIQGDQPGRSNRSDRPPRSSETDRRSGRGPRTQETQSHEQ
RTPDQRAPEPDRAELINPERAALIGEPRTEAPARPTRDEPRDRNAQRGHSPRRSGRFNPE
APAEPARDDRHGRSHHSDHRSSGRETHAEPPAYNPRTERIGDRDGDRSGQDKGRDAFLGP
GRNSEPDHNRTAHQDQNYGRLNPIQSVVAPNEVPLGPRGRGRAAARGGSAGTPNSRSDGR
FPNADSPAAPEERHPPTGPASGRGRRNQYEPNPPVNSPSAMTPTPAAHPDRARAINSGPA
GSPTPASGGPTLAPGIHPDRLAQIAPPPPPPPGQPPSHGHSRPPLPPINTPDRPSGGQGG
NSRTPTGNFPAPTDGVPSGPSSNDRGRSGGSRRQLAGINSTLQQAQANMPETNRGTSIRG
RGVARGSIAGSDAQVLTGASPVSTPVQERPNPVGQERAQTNGEDHSQTEHDRSRREHRSE
RGRHSRRSSRERERSPGREREGKEPREHRERRSGAQNQSSTGRDEREPRRSGREPSGSTR
ESHTNPTHGSSRENTGGTRETRHRTDRGDGGRGDAATGPRNEEWAGNPRGAPRGGPREGG
LRPNDDRREDRGRKRRSEDAAGFPNDREKRQRR
NT seq
7302 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaacgcaaggctcgtggtggccctgcaggcgaaggcggcagaccctcaccc
catcgacccggagacatgccgctgggccagcgcgaacgagatttctcagagggaggaggc
agaggtggccgcggcggcagaaatactagaagaaatgatcgccgagattccgcccaagga
caatcatcacagcctggtacccagtcggcaagcgcttcccgcgtcacgtccccgactgtt
cctcgcccgccctctaccccgtcgcagccgcaacatcctgcaccgattgcaacaggaccg
ccttcggcaccaatctcgcatccgccctccccagtaccgacaagctactgctatgagcat
ctcaccgacgaggcgattacctcatgggaaaccggcagcaggcaaaagctagtcacacat
ggagttgattcacggtcggatgtggacatcgaggagctggccgccatctatcaagagttt
atccatgccgtcatcgaggggcggttgtcacctgttgacgctggcgcttgcatgaaagag
atcctcggctcggaatcgcaagaaatgattaaggagtctttctcgttcgagcctcacact
ctctttctcgatactttgtccatcatcttcgacaatgatcgtggcctattcagacctcag
ctccgcgacttcattcaagcgacaggtgtctcgtccgagcttgtgcgccaaactctagat
gctcagcttcttcaagatttgggcatgatccgcgagacattcgttaagcttggtatcagg
cgtgcgacaaatctcttataccgacaggcaaattacaacctactccgcgaggagagcgaa
ggttactccaagctcatgactgagctctttacaactagtagctcggagcccccgtctgcc
gaaacggcccatgcagcttttgagcgtctcaagggcctcattggaacttttgatctcgat
gtgggaagagtcctcgatgtcacactcgacgtctttgctgcggtcctcatcaagcaattc
cgattcttcatcaagcttctcagagtcagctcttggtggcctagcaaccaaaaccctgct
tcatctacatatgcaggtggcctacctccctgggctcttcccgagtcgtcgcactggatg
accagccaagaagttgaacttgagagtgccgagctaaggcgccagcgcgatatcgagttc
tgggaccgtgctcgtgaggttcacctcgatgcattcttccagcttggagggagacaagtc
acaggcaaccacctcaagttgcttgaagaatcagagtctgcatccgaagctgaagtcaat
gctgcatccgcatggatgaagttgacaaagacccttccgcctcagggcaaccgtaccgcg
gcccagctgcttggtttcaagctcagattctacgcctccgatgccagagatcccgatgat
gtcctgccagctaacctgctttaccttgtcgcacttctcgtcaaggttggcttcatgtca
ctggtcgacatctatccgcatctctggcctctcgacgaggagatggacaccatgagagaa
aagaagatgaaggagctagacgaaaaggagagacaaagccgacctggtgccgcacaaaac
gccctacttatggcgggtgccttgcctgacgacagcgcaccgccccctacgactcgcact
cgtgccgttgcagggaaagcagatgcagagtccaagacagacgctgccgcagacgaaaaa
gaaaagctgccagagcccatggagcagaaggcagcactactcatatgccttttgaccatt
ggtgccattccggagtcccttttcattcttggccgcttcccctggctaccagaagcctat
cccgaggttcttgaaagaattcatcgcattctcaactacagtgtggagaaggtataccaa
gaaagtcgaccgattcccgtcggctcagctgagcctacctcgaaaccaattgccgacatt
gatcaaagcggtgtacccaagggttccgtgaagctttccaccctgccgcccaagaagtct
atgagatggcccttccccgacggattcgacggcagagatcagcactacaaattctactgg
gatgaatgggcagacaacgtccccgtgtgccagactgtcgaagacatcttcacgttgtgc
gatacattcctgaatctttccggcgtaagcatcggcaaagatcctgcattactggccaag
tttgtcagcatcggagcgaagagcttggccgaggaccgctcccagcacaacatggatcga
tggcaggacctcttgcgtcgcattctggttcctgcgctcagcatgaccaacgccaatgcg
gctattgtcaactccgtatgggacctgctcaagctgtatcctgtcacaacccggtactcc
atctacgctgagtggttcgagggccagatttcccgattgccggcaatgaaggcagccttt
actcgcactcgcgtggagaccagaggtgtgatgaagcgcatttctctcacgaatctcagc
gagatggccaagtcgctggctaagaccagctactcgtcgccaggcattgtgttcaaggag
gctctcggccagattgaggcctacgcaaatctcatcgaagcctttgttgagtgcgccaag
tacttcactgacttggcctacgatgtcctcatctggtctctcgtgagctccatgggcgga
aagcgaagccgtactcaggaatcttccatcctgctgaccagtaaatggcttcaagcgctt
tccaagttcgccggcaaagtcttcaagcggtactccattttggactcgacaccaattctc
cagtacgtgaacgaccaactcttccagggcaactcgaccgacttgattattctcaaagag
ctcgtgtcgtcaatgggaggtgttgtgcaagttcttgactttaccgacgaccaaattttg
gccatgtctggaggagaagttctgcgacgccagacactgctcagtctccaagacaagcgg
tttgagtcgactcgcagcgccaagcgcctcatgcagtcccttggcgactcgaaactcgct
ggacgtctgctaatcaacgttgcccaataccgacaagctgctatttacaagcttcctgac
gacgaggcgcacatcaagtacatcggctcggtcatcgatgacagccatcaaattctagtt
caatatctcgaccttctacggactaaccttgagcctcacgagttcgaagcattggtgcct
gcgatcaccatcctcatggacgaatttggacttgacgcgagcctggcgttcctcatcggt
cgtgagggcgttgcttacgacatgttcaccaaaaagcaagactccgccatcgctatcgac
tccgatggcgacttgtcaatgagccaagacgcaaccgaggcaaaagaagccaccggagag
tcgactgaggcggaggacaagaaaccgacgctggcagaagttcgggagaaagcgaagaag
gatgccggccgccagatccatgaggcgcttgaccctattgttacgtcgatgaagtccata
actccaggtacctcatggaccaagctcagtccagagttctatgtcctcttctgggctcta
cagctcggtgacatcgaggtcccagctgctagctacaacaatgctcacaagcgactctcg
aatctgaagaaagagctcgacagagatcgctctgacatgagtcgcagcggtatcaacaag
aaggaagccaagaaggcggagctgctcaagatcagcaacgaactgccgaaggaggcggat
cttcagatgaagcgagcgcgagtcgtcagagattacatgacggatcacatgggaacctgg
ttcacgggttcaacggagaagttgaatggtctgtctgatgcgatcctcgagcaatgctta
cttccccggctggtgctctccgctagcgacgctgagtactgctatgtgtttatcaagaag
ctccacatgctcggcgcgcccacattccgtctgaaggcattgtatgatcggcttttctgt
gtcaacaggctgcgggccatgatcttcacttgcacagtccgcgaggcagagcacctgggc
aggttcctcaactgcatcctcaaagacttggctaggtggcatcgtgacacgaatgcttac
gacagagaagctgtcggcaagcgcagcttcttcctcgggtttgctaccgagttcgatgac
aagggactgccatcatcttattatgatcatgcgcaattccgcgacatcttgtacgggtgg
cacagcaagctcaacttggcattgaagtcatgccttgccggcatggaatggatgcatatc
cgtaacgccatgacaattctcaaggcggttctcgaccacttcccagcaatcaccttcatg
ggcacacaatttatcgaccaactcaagacaattacagaccgtgaggcagcttcgaagact
gcgtctgctggcgaggagggacatcgcgtggatctttcggtcgcggcccaaggtgctttg
tcggaattgcagaggagaaaagacaagtggattatacccgccggcttccgcccgaacatg
aacggtggaaaggccaaggatgagtcaacatcaaccagtttgcgcccgaccgcgactgaa
ttccagcccagatcggccaggaccgcggcagagcaggaagatggcgaagtcaaggacggc
gaggtcaaagagggcaaagatgctggatcccgatcagcagcaccctcggcgccagccacg
cttgctcaaaaggatcccaacttgcctcccaagccctccgcctcccaggcagacacagca
aagggaggcttcccgcgtggcgacatcgggtccaccacttcgagcaagccgccaacacca
aagccggcgaatgcaacgcccttaccgaacaatatgaaccaccgggatgtgcctagatcg
actcctacacccacgggaccagacagaagtgcgcacaacctgcccaagcgaccagacgtc
cctatccctggccattacggtcgtactcatttcactcctgacgctttgccagaccgggtc
cgagaaccgagagatgcacgagagcctcgcggccccagggatacaagagagcctcgagac
accagagatcacagggatcctcgcgagccctcaagagaacccagattcgccgagccatca
cgtcccgaccgcagtcgagacttttctggacaagacaggagaggacccgatgctccccct
cgagaacctggtcgcctttccgagaaagattggccttcgagaccggactcgctaccccct
cgtcgcgatcacgggccccatgagcgcgaaggtcgtccctcccgagatagagtgcctccg
acaaatggacgcgtgtctgaatcgggaagactgtctagagaacctgctgtggccaccccg
ccatctcaacctactcagaagccagccgaggatcctcctgtcaaccctgctcgcctggcc
ttgattcaaggagaccaacctggtaggtctaaccgctcagaccgcccgccccgatcatcg
gagacagaccggcggagcggccgggggccgcgtacccaggagactcaaagccacgagcag
cggactcctgaccagcgtgctccggagcctgaccgtgccgaattgattaaccctgaacgt
gctgccctgatcggtgagccacgaaccgaagcgccagccaggccgacaagagatgagcct
agagaccgaaatgcccaacgaggtcattcgccccggagaagcggaagattcaatccagag
gcaccagcagagcctgcgcgggatgacagacacggccgttcccatcactcggatcatcga
tcctctgggagagaaacacatgcagagccccctgcctataaccccagaacagaacgcata
ggcgacagggacggtgaccggtctggccaagacaagggcagagacgcgttcttgggtcct
ggccgaaattccgaacctgaccacaaccgcactgctcaccaggaccaaaattacggtcgt
ctgaacccaattcagtcggtagttgccccgaacgaggtgccactaggaccccgtggtcgt
ggccgagctgctgcccgaggtggatctgcaggcaccccgaactcacgatctgatggtcgc
ttcccgaatgcagacagccctgcagcgcctgaagaacggcatccacccacaggtccggcc
tccggcaggggacgtcgtaatcagtacgagcctaatccgcccgtcaactctccgtctgcg
atgacaccaactccagcagcacaccccgatcgcgcccgtgctatcaactcgggcccggcg
ggctcacccactccagcctcgggaggtcctaccttggctcctggtattcaccctgatcga
ctggcacagattgctccaccaccacctccccctcctggacagccaccgagccatggtcac
tctcggccgcctctgccccctatcaacacaccagaccgcccgtcaggaggtcaaggtggc
aacagccgaacaccgacaggcaattttccggcacctactgacggtgtaccgtcagggccg
tcatcgaatgatcgaggtcgcagcggcggcagtcgtagacagcttgcgggtatcaatagc
actttacagcaagcacaggcaaacatgcctgaaaccaacagaggcactagtatccgcggg
cgtggggttgccagaggtagtatcgctggctccgatgctcaagttctgacaggtgcatca
ccggtgtctacgccagtccaagaacgtccaaaccctgtgggacaagaaagggcccagaca
aacggcgaggaccattcacaaaccgagcatgatcgcagccgtcgcgagcatcgttcagag
cgtggccggcactcaaggcgcagcagtcgcgaacgagaacgcagtcccggtcgcgaaaga
gagggcaaagaaccccgtgagcacagggagagaaggtccggagctcaaaatcagtcatcc
actggtcgagacgaacgtgaaccccgacgttctggtcgagagccgtctggcagcactagg
gagtcgcatacgaacccaacccacggcagtagccgggagaacacaggaggtactcgcgag
actcgccatcggaccgatcgtggagatggtggacgtggagatgcagctacggggccaagg
aacgaagagtgggctgggaacccacggggcgcgcccagaggagggcctcgtgagggaggt
ctaagaccgaatgatgaccgacgcgaggatcggggccgaaagcgtcggagcgaggatgca
gcaggcttcccgaacgaccgagaaaagaggcagagacgctag
DBGET
integrated database retrieval system
