Colletotrichum fioriniae: CFIO01_03139
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Entry
CFIO01_03139 CDS
T04796
Name
(GenBank) RNA recognition domain-containing protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03013
Nucleocytoplasmic transport
cfj03015
mRNA surveillance pathway
cfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CFIO01_03139
09122 Translation
03013 Nucleocytoplasmic transport
CFIO01_03139
03015 mRNA surveillance pathway
CFIO01_03139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_03139
03041 Spliceosome [BR:
cfj03041
]
CFIO01_03139
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
CFIO01_03139
Spliceosome [BR:
cfj03041
]
Common components
Common spliceosomal components
Cap binding complex
CFIO01_03139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-ProteinID:
EXF82205
UniProt:
A0A010R099
LinkDB
All DBs
AA seq
190 aa
AA seq
DB search
MQVRHRNTVERLDRPSAYYHNRNKRRRNDNRDAAREARDAEDEAATKNEPLPEDPLANAT
TLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYTHQDALDCMKY
IGGTKLDERVIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDFDEGRGGLGRAIQMQRDRD
DRMGEYEESR
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcggcacagaaacacagtagagcgcctcgacaggccgagcgcatactaccac
aaccggaacaagcgcaggaggaacgacaaccgcgacgccgcccgcgaagcccgcgacgcc
gaagacgaggccgccaccaagaacgagcccctccccgaggaccccctcgccaacgcgacg
acgctctacgtcggcaacctctccttctacaccaccgaggagcaggtctacgagctcttt
tcaaagtgcggcgagatcaagcgtctcgtcatgggcctcgatcgcttcaacaagacaccc
tgcggcttctgcttcgtcgagtactacacccaccaggacgccctcgattgcatgaagtac
attggcggcaccaagctcgacgagcgcgtcatccgcaccgatctcgacccgggcttcgag
gaggggagacagtacggtcgcggaaagagcggtggacaggtgcgcgatgagtatcgtgag
gactttgacgagggacgtggtgggcttggtagggcgattcagatgcaaagggaccgggat
gatcgaatgggcgagtatgaggagtcgcgatga
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