Colletotrichum fioriniae: CFIO01_03146
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Entry
CFIO01_03146 CDS
T04796
Name
(GenBank) pre-mRNA processing factor 3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CFIO01_03146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfj03041
]
CFIO01_03146
Spliceosome [BR:
cfj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CFIO01_03146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
FLJ43738_C
Motif
Other DBs
NCBI-ProteinID:
EXF82212
UniProt:
A0A010QQ29
LinkDB
All DBs
AA seq
485 aa
AA seq
DB search
MDRQSDSVGLGPRHDPNSRISKPESAADKMAALKARVAAAVGVSKAKGGLNVGLHPVLES
LGQTKAPARPNDGKPSGSRPHSDSKFSTGFKASDAAGRGRDAPLSNPYFNDQQAAQPANG
RQRQARSLNFHAKGKFIQQAAALRRQAALEEMKKRIAAQTRKAGIEDELEMEKNLVVDPP
PDIEWFDGGLVDGSSYDCIDDESKLKIKEDTIITEYVQHPVALEPPQEKNTPALKPMYLT
PKEMAKTRRQRRMAELKEQQAKIRLGLVPAPPPKVKKSNMMRVYADSAVKDPTAVENLVN
RQIAERQQNHLEANEDRKLTKEEKHVKLATNQEKDAAKGIHILVLKIDSLANGRNRFKIQ
KNAEQHALTGICIMHPRMNLVIVEGGEHSIRKYKKLMLERINWTENAHSQEGKTQQQVRE
WLVAENESGDLKDMSHNECKLVFEGEEKARAYRKWGSKVCESDAEARDALARAKMDNFWA
VAKNM
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggatcgacaatcagactcggtaggccttgggcctcgtcatgaccctaactcccggatt
tcgaagcctgaatcggccgccgataagatggctgcgctcaaagcaagagttgccgcggca
gtcggcgtctccaaggccaaaggaggcctcaacgtcggactacatccagtcctcgagagt
ctcggacagacaaaggcgccagctagacccaacgatggaaagccatccggcagtcgaccg
cactctgactcgaagttctcgactggattcaaagcttcagatgctgctgggcgaggccgc
gatgcgccgctatctaacccgtatttcaacgaccagcaggcagcacagcccgcaaatgga
agacaacgtcaggcgcggtcgctaaacttccatgccaagggcaagttcatccagcaagcc
gcggcgctgcggcggcaagctgccctcgaagagatgaagaagagaatcgcggcgcaaaca
aggaaagccggtatcgaagatgaattggagatggagaagaaccttgttgtcgaccctcct
ccggacatagagtggtttgacggtggactggtcgatgggtcctcctacgactgtatcgac
gacgaatccaaattgaaaatcaaagaggacaccattatcacggaatatgtacagcacccc
gtcgcgttggaaccgccgcaggagaagaatacgccagccctgaagccgatgtacctgaca
ccgaaagaaatggccaagaccaggaggcagagaaggatggccgaactcaaggagcagcaa
gcaaagatcagacttgggctagtgccagctccaccccccaaagtcaagaagagcaacatg
atgcgtgtttacgcagactctgcagtgaaggatccaacggccgtggaaaatctcgtcaac
aggcagatcgccgaacgccagcagaatcacttggaggccaatgaagatcgcaagctcact
aaagaagagaagcacgtcaaacttgctacgaaccaagaaaaggatgctgcaaagggcatc
catatactggttctcaaaattgacagtctcgccaacggccgaaatagattcaagattcaa
aagaacgccgaacagcatgctctcacggggatctgcatcatgcatccaagaatgaatctt
gtcattgttgagggtggcgagcacagtatacgcaaatacaagaagctcatgcttgagcgg
attaactggactgaaaacgcacattcgcaagaggggaagacccaacaacaggttcgcgaa
tggctggtagcggaaaacgagagcggcgatttgaaggacatgtcccacaatgagtgtaag
ctggtgtttgaaggcgaagagaaggcgagggcataccgcaagtggggaagcaaggtctgc
gaatctgatgccgaggccagggacgcgttagcccgagccaagatggacaacttttgggcc
gtcgcgaaaaacatgtaa
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