Colletotrichum fioriniae: CFIO01_03147
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Entry
CFIO01_03147 CDS
T04796
Name
(GenBank) RNA polymerase Rpb1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFIO01_03147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_03147
Enzymes [BR:
cfj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFIO01_03147
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CFIO01_03147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
EXF82213
UniProt:
A0A010SBS7
LinkDB
All DBs
AA seq
1704 aa
AA seq
DB search
MNISQPISSSVETVEFTFLTEEEIRAISVKRIENDSTFDNLLNPVPGGLYDPALGSWGDA
LCATCNLNQSSCPGHAGHIELPVPVYHPVFLDQVLRLLRSQCVYCKGFRMRHREINRYSC
KLRLLQYGLLHEAHLVDAIGEELKGLALPGVPTDYESEAEEEGTSTVDNIIGAREAYVRQ
SLKSHKLNLGEVRKGKHEGAIEMRRELIKDFLTQITKPKRCDNCGGISPTYRKDRFVKIF
EKALSERDMAQMAQKNLHLKDSMATPAHQRKSKRGNTDTDEGVADVDANSSGEENDVDMR
DAHDDDLEKEEAESRVDAVRQIPGQQRYLSAMEVRARLRELFDKEQDIMYLVYNSKPVTK
KAAKVSADMFFIRTILVPPNKFRPEARTGDSQISEAQQNSLYKMIMRNCGSIARIHQSVG
GTDQYGRARDINDLHQVWTELQESVNSLIDKSKNPVQGAAAKRNEDGIKQKLEKKEGLFR
KNMMGKRVNFAARSVISPDPNIETNEIGVPPVFARKLTYPEPVTSHNFKDLQQAVMNGVD
KWPGAAAIEYENGQIVNLRSKSADDRQSLANQLLTPTNAQLSGMKGKKVYRHLTNGDVVL
MNRQPTLHKPSIMGHRVRVLPGEKTIRMHYANCNTYNADFDGDEMNMHFPQNEVARAEAL
QIADTDHQYLSGTAGKPLRGLIQDHLSVSVALCNKDTFFDRDSYQQLIYSALRPESGHIL
GERIELLPPAVIKPRPRWTGKQVISTILKNIKPPNGEGLWMSGKCQVKGEQWGKGHMEEG
SVLFQDGQFLTGILDKAHLGPSSGGLVHSIHEVYGPAVAGKLLSAMGRLLTRYLNMRAFT
CGMDDLRLTSEGEQARKEALKAAKDVGLQVAAKYVSLEDKAPTSTDRELLTRLEEVMRDD
TKQEGLDLLMNQSGGGVSSAVTAACLPVGLVKQFPKNQMQSMTTSGAKGSQVNANLISCN
LGQQVLEGRRVPLMVSGKSLPCFKPFETNVRAGGYIVQRFLTGIRPQEYYFHHMAGREGL
IDTAVKTSRSGYLQRCIIKGMEGLTVTYDSTVRDADGTLVQFLYGEDGLDPTKQKYLTDF
SFILRNVGSESAQLNFSNGFREQFAGTKDEILKHMKSAIKHAKLDSPGAKDPIISLVNPA
RVAFATSESFYEKMTKYIKDNKDGLIRDKSSGPSGLVDAPAVSKKSAELVFAAKYMRSLV
EAGEGVGIVAGQSVGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREILMTASRSISTPAMT
LLLHPELSAAEGEVFAKSISVLPLADVLDTATVKERIGKDINGSLAKLYDVRLNFFPAAE
YTKAYAIDPSDVMDTIEKRFLDHLLKMMGKEIKKRNSDSTSATPEVGVKSGVVEMVSGNG
EARPTNNDDDDDDEDGDGDATSAKNRANRDEAVSYGPNDDEDDAIQRQMERENSEEEDEG
FEGSPLPAADKNGSEDEDDGDKDMDSEAGGWRAERVKQLYSPVTKFNYDSAGEWCEFTLE
FTADTPKVLMLNIVQAAVKKSVVQQIPGVGSCTFTPDHKITNAAGKDVTVSAIYTSGCNL
EAMQKYGDFINPNQITTNDIGAVLDVYGVEACRNNIVSELAGVFGGHGISVDNRHLNLIA
DYMTRNGDYTPFNRNGLRGNVSPFTKMSFETTLAFLKDAVLDGDWDDLKTPSGRIVMGRL
GKIGTGAFDVLTALPTHHMSSNIE
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctctcaacccatttcatcgtctgtcgagacggtcgagttcacattcctcacc
gaggaagaaatcagagcaatctcagtcaagcgcattgagaacgacagcacattcgacaat
cttctgaaccccgtccctggtggtctctatgatcctgctctaggctcatggggcgatgct
ctctgtgcaacttgtaacttgaaccagtcttcatgcccgggccacgccggccacatcgag
ctccccgtaccggtataccatcctgtatttctcgatcaagttctccgtcttctaaggtcg
caatgcgtctactgcaaaggcttccgcatgcgccatcgcgaaatcaatcgatactcctgc
aaacttcgactgctgcaatatggccttttgcacgaggcacacttggttgacgccattgga
gaagaactcaagggcctcgcactcccgggtgtgcctaccgactacgagagcgaggctgaa
gaagagggcacctccacggtcgataacattatcggggcccgagaggcatacgtccgccaa
tctctcaaatcacacaagctcaatctgggcgaggtcaggaagggcaagcacgaaggtgct
attgaaatgcggagagagctcatcaaggacttcttgacacaaatcaccaagcccaaacga
tgcgacaactgtggcggtatctcgcctacctaccgaaaggaccgcttcgtcaagatattc
gaaaaggcccttagcgagagggatatggctcaaatggctcagaaaaacctacatctcaag
gattctatggcaacaccagctcaccagcgcaagtcaaagcgcggcaacaccgacaccgac
gaaggtgttgccgacgttgatgcaaactcatcgggcgaggaaaacgatgttgacatgcgg
gatgctcatgatgacgacctcgagaaggaggaggcagagtccagagttgatgctgtccgt
caaatccccggtcagcagcgataccttagtgcaatggaagttcgcgcacgtctgcgggag
ttgttcgacaaggaacaagacattatgtacctcgtctacaactcgaagccagtgaccaag
aaggcagctaaagtgtctgccgacatgttctttatccgaactattcttgttccccctaac
aagttccgaccagaagctcgaactggcgattctcagatttccgaggcccagcagaattcc
ctctacaagatgatcatgcgaaactgcggtagcattgcaagaatacaccaaagcgtgggt
ggcacagaccagtacgggagagcaagagacatcaacgatttgcaccaagtctggacggaa
ttacaagagtctgtcaattctctgatcgacaagagcaaaaaccccgtccaaggcgcagct
gcgaaaaggaacgaagatggcatcaagcagaagctggagaaaaaggagggccttttccga
aagaacatgatgggaaagcgagtcaacttcgctgctcgcagtgtcatttcccccgacccc
aatatcgagaccaacgagattggtgtgcctcccgttttcgcacgcaaacttacctacccc
gagcccgtcacgagccacaacttcaaggatctgcagcaagccgttatgaatggtgtcgac
aagtggccaggtgcggctgctatcgagtacgagaacggacaaattgtcaaccttcgatcc
aagtctgcagatgaccgccagtctcttgccaaccaactcctcacgccgaccaacgcccag
ttgagtggcatgaaaggcaaaaaggtttaccgacatttgacgaacggcgatgttgttttg
atgaaccgtcagccgacactccacaagccgtcaatcatgggtcaccgagttcgcgtgttg
ccgggagaaaaaacaatccgaatgcactacgccaattgcaatacgtacaatgctgatttc
gacggcgacgagatgaacatgcacttcccccagaacgaggttgccagagctgaggctctt
cagatcgccgacacagaccatcaatatctgtctggcacggcaggcaagcctctccgtggt
ctgattcaggaccatctttcagtctccgtcgctctttgcaacaaggataccttcttcgac
cgagactcatatcagcagctcatctactccgccctccgcccagagagtggtcatatcctt
ggcgagagaattgagctccttcctccggcagtcatcaagccaagacctagatggacagga
aagcaggttatcagcacgatcctgaagaacatcaagccaccaaacggagaagggctctgg
atgtctggaaagtgccaagtcaagggcgagcaatggggcaaaggtcatatggaagagggc
tcagtcttgttccaggacggacagttcttgactggtattcttgacaaagcccacctgggt
cctagttcaggcggtctggtccattccattcatgaggtctatgggcctgctgttgcgggc
aagttgctcagtgccatgggccgcctcctcactcgctacttgaacatgagggcctttacg
tgcggcatggacgatttgcggctcacatcggagggtgagcaggctcgaaaggaggcattg
aaggcagcgaaggacgtcggactccaagttgcagccaaatacgtttcactggaggacaag
gcacctacgagcaccgatcgggaactgcttactcgcctggaggaggtcatgcgcgatgac
actaagcaagaaggtctcgatctgctcatgaaccagagcggtggcggtgtttcaagcgcg
gtcacagcagcttgtcttcccgtcggtctggtgaagcagttccccaagaaccagatgcag
tcaatgacgacctctggtgctaagggtagtcaggtcaacgctaacctcatttcatgcaat
ctgggacagcaagttcttgagggcagaagagtccctttgatggttagcggaaagtctcta
ccctgtttcaagccattcgagacgaatgtccgtgcaggaggctacattgttcagcgattc
ttgactggtatccgaccccaagaatactacttccatcatatggctggtcgcgagggtctt
atcgatacagctgtcaagacgtctcgctctggctacctgcaaagatgcattatcaagggt
atggagggacttacagtgacgtatgactcgacggtgcgagatgccgacggcaccctcgtg
cagttcctctatggcgaggacggccttgacccgactaagcagaagtacctgaccgacttc
agcttcatcctccgcaatgttggttccgagtcggcccagcttaacttcagcaatggcttc
agggaacaatttgccggcaccaaggacgagattctcaagcacatgaagagtgctatcaag
cacgcaaagcttgacagccccggggccaaggaccccattatttccctggtcaaccctgcg
agagtagcatttgcgacatccgagtccttctacgagaaaatgacaaagtacatcaaagac
aataaggatggtctcatccgcgacaagtcaagcggtccatctggcctggtggatgcaccc
gccgtcagcaaaaagtcggcagagcttgttttcgccgccaagtacatgcgatcactcgtt
gaggctggtgagggtgtcggcattgttgctggccaaagtgtgggagagccttcgacacag
atgactctcaacacgttccatttggcaggtcactcggcaaagaacgtgacgctcggtatt
ccacgtctccgtgaaatcctcatgacggcaagtcgatctatctcaacaccagctatgacg
ttacttctccatcctgagttgtccgcagctgagggagaggtgtttgcaaagtctattagc
gttctgcctcttgccgatgtgcttgacacagcgaccgtcaaggagcgcattggaaaggac
atcaatggttcattggccaagctgtacgacgtgaggctcaacttcttccctgctgcggag
tacaccaaagcctacgccatcgatccctctgatgtcatggataccatcgagaagcgattc
ctagatcacctcttaaagatgatgggcaaggaaatcaagaagcgcaacagcgattccacc
tcggcgacgcctgaagttggcgtcaagtctggcgtagtagagatggtgagtggcaacggt
gaggcaagacctaccaacaacgacgatgatgacgacgacgaggatggcgacggtgacgcc
acgagtgccaagaatagggcaaacagggacgaggctgtatcatatggtccgaatgatgac
gaggatgacgcgattcagcgacagatggaacgagaaaattccgaggaagaagatgaaggg
tttgagggtagcccactgccggcagccgataagaacggctctgaggacgaagatgacggg
gacaaagacatggacagtgaggctggtggttggagagccgagcgagtgaagcaactctat
tctcccgtcaccaagttcaactacgacagcgcaggagagtggtgcgagttcactctcgag
ttcacggcagatacccccaaggtattgatgctcaatatcgtgcaggcggcggtcaagaag
tcagtcgtccagcagattcctggcgttggctcttgcaccttcacacccgatcacaagatc
acaaacgccgctggcaaggatgtgaccgtgtcggccatctacacatcgggttgcaacctc
gaggcaatgcagaagtacggcgacttcatcaacccgaaccagatcacaaccaacgacatt
ggcgccgttctagacgtgtacggagtggaggcatgccgaaacaacatcgtatctgaattg
gccggcgtcttcggcggtcacggtatcagtgtcgacaacagacacttgaatctcattgcc
gactatatgacgcgcaatggtgactacacgcccttcaaccgcaatggtctgcgtggcaat
gttagtcccttcaccaagatgagtttcgagacaaccctggctttcctaaaagacgccgtt
cttgatggcgactgggacgatctcaaaacacccagtggtcgtattgtcatgggccgcttg
ggcaagattggcacaggtgcttttgacgtcttgacagctttgcctacgcatcacatgtcg
tccaacatcgagtga
DBGET
integrated database retrieval system