Colletotrichum fioriniae: CFIO01_03176
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Entry
CFIO01_03176 CDS
T04796
Name
(GenBank) RNA recognition domain-containing protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_03176
03041 Spliceosome [BR:
cfj03041
]
CFIO01_03176
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CFIO01_03176
Spliceosome [BR:
cfj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CFIO01_03176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_7
RRM_8
Cas_Cas2CT1978
RRM_PARP14_3
Motif
Other DBs
NCBI-ProteinID:
EXF82242
UniProt:
A0A010QQ60
LinkDB
All DBs
AA seq
485 aa
AA seq
DB search
MADNGPASNAAQLPPPPQPNAGAPGYENGQNGQSNPAHMPPPPLHIPQNNNPIPTAITSP
MSGVDKVMSPGSAGGFGRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIP
DKNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIF
VGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG
EWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPS
WQTTCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDSHESAAMAICQMNG
YNVNGRPLKCSWGKDKTPNPQGGGAAGFDPSQQAYSPQSAASGPGGYPGTPTAYFPQYGG
QYQGQHGNYGGPAAQSPAGYGAQPMGYGGPQSAGGYGRGQQPPNQQWPQGPQGQNFNNGF
AGYQG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacggacctgcttcgaacgcggcgcagctgccccctcctcctcagccgaac
gctggagctccaggctacgagaacggccagaatggccagtcgaacccggcgcacatgccc
ccgcctccccttcatatcccgcagaacaacaacccgattccgactgccattacctcgccc
atgtctggggtcgataaggttatgtcgcccggtagcgctgggggattcggccgccgtgct
gcccccgagcctaacaagcgggcgctgtacgtgggaggcttggatcaacgtgttaccgag
gatgtcttgcgtcagatcttcgagactactggtcacgttcagaatgtcaagatcatcccc
gacaagaatgctaagggctacaactatggattcgttgagtacgatgatcccggtgcggcc
gagcgcgctatgcagaccttgaacggaagacgtgtgcaccaatccgaaatccgcgtcaac
tgggcttaccagtccaacacctcgagcaaagaggacacctccaaccacttccacatcttt
gttggcgaccttagtaacgaagtcaacgacgaggtcctgacccaggctttctctgccttt
ggctccgtatccgaagctcgcgtcatgtgggacatgaagactggccgatctcgtggatac
gggttcgtcgctttcagagaccgcccggacgccgagaaggcactcagctccatggatgga
gagtggcttggctcgcgcgccatccgctgcaactgggcaaaccaaaagggtcagccgtct
attgcgcagcagcaggcgatgcaggctatgggcctgacgccgacgacgccttttggccac
caccagttcccagctcatggcgttgccagttacgaggtcgtccttgcccagacaccgtcg
tggcaaacgacgtgctacgttggcaatctgactccttacaccacgccaaacgacgtggtc
cccctgtttcagaactttggctttgtggttgagtctcgattccaggcggaccgaggattt
gcattcatcaagatggacagccacgagagcgcagccatggcaatctgccagatgaatggc
tataatgttaatggacgccctttgaagtgtagctggggcaaggacaagaccccgaaccct
cagggcggcggcgccgccggcttcgacccctcgcagcaggcgtacagcccgcaaagcgcc
gcttccggacccggaggctaccccggcaccccgactgcctatttccctcaatacggcggt
caataccaaggtcagcacggcaactacggtggcccagccgctcagtccccggccggttac
ggagcgcagcccatgggatacggtggaccgcagagtgccggaggctatggtcgcgggcaa
cagccacccaaccaacagtggcctcagggaccccagggacagaacttcaacaacggcttc
gccgggtaccagggctaa
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integrated database retrieval system
