KEGG   Colletotrichum fioriniae: CFIO01_03355
Entry
CFIO01_03355      CDS       T04796                                 
Name
(GenBank) RNA polymerase Rpb6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03020  RNA polymerase
cfj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CFIO01_03355
  09124 Replication and repair
   03420 Nucleotide excision repair
    CFIO01_03355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfj03021]
    CFIO01_03355
   03400 DNA repair and recombination proteins [BR:cfj03400]
    CFIO01_03355
Transcription machinery [BR:cfj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CFIO01_03355
  RNA polymerase III system
   RNA polymerase III
     CFIO01_03355
  RNA polymerase I system
   RNA polymerase I
     CFIO01_03355
DNA repair and recombination proteins [BR:cfj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CFIO01_03355
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: EXF78698
UniProt: A0A010S2A0
LinkDB
AA seq 153 aa
MSDFGDDDVGGGDETMYEDEAADYWDPEVPADDEEVGRAEGDEEDADNVVASGDPSAAAN
AGKGNEKSHRDKKIPDDQRTTTPYMTKYERARILGTRALQISMNAPVLVDLEGETDPLQI
AIKELREKKIPLIVRRYMPDGYYEDWTCEELLQ
NT seq 462 nt   +upstreamnt  +downstreamnt
atgtctgacttcggcgatgacgatgttggcggaggcgacgagaccatgtacgaggacgag
gctgctgactactgggatcccgaggttcctgcggacgacgaggaagttggaagagcagag
ggcgacgaggaggacgcggacaatgtcgttgcatcgggtgacccctctgcggcagcgaac
gcaggcaagggcaacgagaagtcgcaccgcgacaagaagattcccgatgaccagcgcacg
acgactccctacatgacaaagtacgagcgcgcccgcattctgggcacccgcgccctgcag
atcagtatgaatgcaccggtgttggtggacttggaaggagagacggatcctcttcaaatc
gcgatcaaggagctccgagagaagaagatccctctcattgtgcgccgctacatgcccgac
ggatactacgaggattggacctgcgaggagcttctccagtga

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