Colletotrichum fioriniae: CFIO01_04261
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Entry
CFIO01_04261 CDS
T04796
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CFIO01_04261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_04261
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_04261
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CFIO01_04261
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CFIO01_04261
U7-dependent histone pre-mRNA processing factors
CFIO01_04261
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
Anti-Pycsar_Apyc1
RMMBL
Lactamase_B_3
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
EXF80554
UniProt:
A0A010RRC7
LinkDB
All DBs
AA seq
860 aa
AA seq
DB search
MASKRKASAMAATVSEEPVDPADELMFLCLGGGNEVGRSCHIIQYKGKTVMLDAGQHPAY
DGLAALPFFDDFDLSTVDVLLISHFHVDHAASLPYVLSKTNFRGRVFMTHPTKAIYKWLI
QDSVRVGNTSSNPTSQPVYTEADHLNTFPQIEAIDYHTTHTISSIRITPYPAGHVLGAAM
FLIEIAGLKIFFTGDYSREQDRHLVSAEVPKGVKIDVLITESTYGIASHVPRLEREQALM
KSITSILNRGGRVLMPVFALGRAQELLLILDEYWGKHADFQRFPIYYASNLARKCMVVYQ
TYVGAMNDNIKRLFRERMAEAEASGDGSGKGGPWDFKYIRSLKNLDRFDDVGGCVMLASP
GMLQNGVSRELLERWAPNDKNGVIITGYSVEGTMAKQIMQEPDQIQAVMSRTTAGARRGP
GGESEKVFIPRRCSVAEYSFAAHVDGTENREFIEEVAAPVVILVHGEQHNMMRLKSKLLS
LNASKTAKVKVFSPKNCEELRIPFKQDKTAKVVGKLATIPPPTSLSDPTSLPQQLVTGVL
VQNDFKLSLMAPEDLREYAGLNTTTITCKQRLRLTAAGVDLVRWGLEGVFGSVEELPEMR
KGHPAHDKAVDDAAVANGNGNGAEKVEGDDVDQEMGEEAADEEVARLVAAYLVMGCVAVR
YRSDGEVELEWEGNMLNDGIADAVMACLFSIESSPAAVKRSAASHSHDHEQAPKPLPKNP
HANVPATERLERFLMFLEAQFGADNVNPVAEPRLPPQPEGDAAAATKAIKADDASDASMD
VSDDDAEAEQEKKLEARRRAEIERLIKLGIPVPGIRIKVDKMEAVVWLEDLEVECSHKAF
ADRVRRVCEHAAEVTAPLWG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaagagaaaggcttcggccatggccgccaccgtttccgaggaaccggtcgac
cctgccgacgagctgatgttcctctgtcttggaggcggcaacgaagttggcaggtcatgt
cacattatccaatacaagggcaagacagtaatgcttgatgctggccaacacccagcatat
gatggccttgcggcgctgcctttcttcgacgacttcgatctcagtacggtcgatgtactt
ctaatcagccatttccacgtcgatcatgcggcttcattgccatatgtcttgtcaaagact
aacttcagaggccgggtcttcatgacccaccccacaaaggccatttataagtggctcatt
caagacagcgtccgtgttggaaatacctcgtccaacccaacgtcacagccagtttatact
gaagcagaccatcttaacactttccctcaaatcgaggccatcgattaccataccacacac
accatttcctctatccgcatcacgccctatcctgctggccatgtcctcggagctgccatg
ttcctcatcgagattgcgggtctcaaaatcttctttaccggagactactcacgagagcaa
gatagacatttggtctcagcagaagtccccaagggcgtcaagatcgatgtcctgatcacg
gagtcgacctatggcattgcctcccacgtaccccgcctggagcgcgagcaggccttgatg
aagtccatcaccagcatccttaaccgcggaggcagggtcctgatgccagtctttgccctc
ggcagagcccaggagcttctgcttatcctggatgagtactggggcaagcatgcagacttc
caacggttcccaatctactacgccagcaacctcgccaggaagtgtatggtcgtttaccag
acctacgtcggcgccatgaacgacaatatcaagcgcctcttccgcgagcgtatggccgag
gctgaggcctctggcgacggctccggcaagggcgggccctgggacttcaagtacatccgc
tccctcaagaacctcgaccgcttcgacgacgttgggggctgcgtcatgcttgccagtccc
ggtatgctacagaatggcgtgagtagagagctcctcgagaggtgggcccccaacgacaag
aacggtgttatcattaccggttacagcgtcgagggcaccatggccaagcaaatcatgcag
gagcccgaccagatccaggctgtcatgagccggacgacggcaggtgcccgacgcggaccc
ggtggagagagcgaaaaggtcttcatcccccgtcggtgcagcgttgccgagtactctttt
gcagctcacgttgatggcacggaaaaccgcgagttcatcgaggaggttgcagccccagtg
gtaatcctcgtccacggcgaacagcataacatgatgcgtcttaaatccaagctcctctcc
ctcaacgcaagtaagacggccaaagttaaggtctttagtcccaaaaactgcgaggagctc
cgcatccccttcaagcaagacaagacggccaaggtcgtcggcaagctcgccactatcccg
cccccgacatccctctccgaccccacctccctgccgcagcagctcgtcaccggcgtcctc
gtccaaaacgactttaagctctccctcatggcgcccgaggacctgcgcgagtacgccggt
ctcaacaccaccacgatcacctgcaagcagcgcctccgcctcacggccgctggcgtcgac
ctcgtgcgctggggtctcgagggcgtctttggcagcgtcgaggagctccccgagatgcgc
aagggtcacccggctcacgacaaggccgttgacgatgctgcagtcgccaacggcaacggc
aacggcgccgagaaggtcgaaggcgatgatgttgaccaggagatgggcgaggaggcggcc
gacgaggaagtcgcccgcctcgtggccgcctatctggtcatgggctgcgtcgccgtgcgg
taccgcagcgacggagaggtcgagctcgaatgggagggcaacatgctcaacgacggtatt
gccgacgctgtcatggcgtgtctcttctccattgagagcagtcccgcagcagtaaaacgc
tccgcggcctcccacagccacgaccacgagcaggccccgaaacccctccccaagaacccc
catgcaaacgtcccagccacagaacgcctcgagcgcttcctcatgtttctcgaagcacag
ttcggcgccgacaacgttaaccccgtcgccgagccccgtctcccgccgcagcctgaaggc
gacgccgcggcagccacaaaggcaatcaaggccgacgacgccagcgacgcgtccatggac
gtttccgacgacgacgcggaggcggagcaggagaagaagctagaggcgcggcgccgcgca
gagattgagcgtctcattaagctcggcatccccgtaccgggcatccgtatcaaggtcgac
aagatggaggccgtggtctggttggaggatctggaggtggagtgcagtcacaaggctttt
gctgaccgtgtgagacgtgtatgcgagcacgccgccgaggtcacagccccactttggggt
taa
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