Colletotrichum fioriniae: CFIO01_04809
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Entry
CFIO01_04809 CDS
T04796
Name
(GenBank) ubiquitin elongating factor core
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj04120
Ubiquitin mediated proteolysis
cfj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CFIO01_04809
04120 Ubiquitin mediated proteolysis
CFIO01_04809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfj04121
]
CFIO01_04809
Enzymes [BR:
cfj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CFIO01_04809
Ubiquitin system [BR:
cfj04121
]
Ubiquitin ligases (E3)
U-box type E3
CFIO01_04809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-ProteinID:
EXF81761
UniProt:
A0A010RMT1
LinkDB
All DBs
AA seq
1077 aa
AA seq
DB search
MDPNEGNQAPDAPDVKKMNDIRLRRLAKLGSSTRSPKPEGESSADVETSNSATSEVKAPK
APASPASSSTPKPAASNPFTQLGVKSGSGASSPAASNNTESNKRIASDRATAPAPAKKAN
VEESLDDFSDRILSHIFRITVDPERVVDAHGHKLTFLPEASQELQENGSPLKLTTSILDS
ALLEAVTAIPADKPLLGYLLPSFKRIIRTNILKETAEKREALGEAKRLCVSNALFALTIP
DLFGRSRSESLVTYLLKGHEQDDGVCLDFLREAVKRFPEDEQFPAAFATAMHTLSIKLSA
LSMEDDYKPYISALMSYTKFPPLLNALAQHPSFMTAHKLGSHVEKETILGPFFRISPLQT
EVTMTYFPNPRALNRTQAAPSQDALRAILRVHQDELFTIANAFIRADTDTRSRVLDWFAS
AINGNHKRRALQVDPKEVSSDGFMMNLTVVLDRFCSPFMDTTFSKVDRIEVEYFRRNPRV
DIKEETKLNADQSTSDAFYGTQSQGNSNFISEVFFLTLAAHHYGSEATNSKLKGLERDIK
WYEKHLAAMEAERIKVQNQPQQLAMFELTLKRHTTVLEKAIAMKYAIEGIFLDEKMQELS
LRFMRYVAVWLLRLASQSSYTPDKDLQLPLPAQAPEAFACLPEYALQDVVDNFKFVYRYL
PQIMPSAVGSEMIALCIAFLRSSEYIKNPYLKSSLVTLLFSGTWPFSHFKKGVLGDQLYG
SKFANDNLLHALMKFYIEAESTGVNTQFYDKFNIRYEIFQVIKCVWGNDVYKQQLTRESK
VNRQFFVQFVNLLLNDATYVLDEALTKFPKIHMLQQELEFGNTLSTQDREKKQEELATLE
SQAGSYMQLANETLAMMKLFTSALTSAFTMPEIVQRLASMLNYNLETLAGPKMGQLKVNN
PTKYHFQPRVLLSDFIDIYLNLGSSQAFIDAVASDGRSYKPEVFDKARFILSKRSMKEAI
ELEQLDTLMAKFLESKQLADQAELDLGDIPAEFEDPIMGDLMKDPVILPSKHIVDRGTIV
QHLLSDPKDPFTRQPMTVDDAIPHTELKEKIQKWREEKIAAAKARATGGDAMDTTEG
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaacgagggcaaccaagcgcccgacgcgcccgacgtcaagaagatgaacgat
atccgacttcgacggctcgccaagcttggctcctcgactagatcccccaagccggaagga
gaatcgtcagcagatgtcgagacatcaaactccgcaacgagcgaagttaaggcccccaag
gccccagccagcccagcatcctcatctacaccgaagcctgccgcctcgaatcccttcact
caacttggtgtcaagtccggcagcggtgcgtcgtcaccagcggcatcgaacaacactgag
agcaacaagcgaatcgcctccgaccgcgcaaccgcacctgctcccgcaaagaaagcaaat
gtggaggagtcgttggacgatttttcagatcgaatcctcagccatattttccggattaca
gtcgacccagagagagttgtcgacgcccatggacacaagcttaccttcctaccggaagct
agccaagagctccaagagaacggatcgccgctcaagctgacaacctccatcctcgatagt
gccttgctcgaggccgtcactgcgattcccgccgacaagccccttctcggctatctcctt
ccctcattcaaacgcatcatccggacaaacatactcaaagagacggcagagaagagggag
gctctgggggaggcaaagagactgtgtgttagcaacgctttgtttgcgctcacgatacca
gatctctttggacgatctcgttctgaaagcttggtcacatacctgctcaaaggacatgag
caggacgatggagtctgtctggacttcttgcgggaggcagtaaagcgctttcccgaggat
gagcaattcccagctgcttttgccacagccatgcacacactcagcattaaactatcagct
ttgtccatggaggatgactacaagccttacattagcgctttgatgtcctacacaaagttc
ccgcctctgctgaatgcgttagcacaacaccccagcttcatgaccgctcacaagctggga
tcccatgttgaaaaggagactattctgggacccttcttccgcatttctcccttgcaaact
gaggtgacaatgacatacttcccaaacccgcgggccctgaaccgtactcaggctgcccca
tcacaagacgctcttcgggctattcttcgagtccatcaggatgagctcttcacgatcgct
aatgcctttatccgagctgacactgacacccggagccgggtactcgactggttcgcctcc
gctatcaacggcaatcacaagcgtagagctctccaggttgaccccaaagaggtgtcctca
gatggcttcatgatgaacctcactgtcgtattggaccgattctgctctcccttcatggac
acaacgttctcaaaggtggacaggattgaagtggagtatttccgccgcaacccccgtgtg
gacatcaaggaagagacaaagctaaatgccgaccaatcaacgtcagacgcattctacggc
actcaatctcaggggaactcgaactttatttcagaggttttcttcttgactttggctgcg
caccactacggcagcgaggcaacaaactcgaagctcaagggtctggaaagggatatcaag
tggtacgaaaagcatttggctgccatggaagctgagcggattaaagtccagaaccagccc
cagcagcttgccatgtttgagttgacactcaaacgccacactacggtcttggaaaaggca
atcgcaatgaagtacgcgatcgagggtatcttcctcgacgagaagatgcaagaactgtct
cttcgctttatgcgatacgtggccgtgtggcttcttcgccttgctagccagtccagctac
acccccgacaaggatcttcaacttcctcttcctgctcaggcccctgaggcttttgcatgc
ctgccagagtatgcgctccaggacgtggtcgacaacttcaagtttgtataccgctacctt
cctcagatcatgccgtccgctgttggcagcgagatgattgctctctgcattgccttcttg
cgttcgtcagagtacatcaagaacccatacctcaagtcctccttggtcacattgctcttc
tccggcacctggcccttctcgcactttaagaagggcgtcttgggagatcagctctacgga
tccaagtttgcaaacgataacctgttgcatgctctcatgaaattctacatcgaagcagag
tcgactggtgtgaacacgcaattctacgacaagttcaacatcagatacgagatcttccag
gtcatcaagtgcgtttggggcaatgatgtctacaagcagcagttgactagagagagcaag
gttaatcgacagttctttgttcaattcgtcaacttgctgctcaatgacgcgacttacgtg
cttgacgaggcactaacaaagttccccaaaatccatatgctacagcaggaattggagttt
ggcaacacactatccacgcaagatagagagaagaagcaagaggagttggcaacattggag
agccaagcgggctcatacatgcagttggccaatgagacgctggcgatgatgaaactcttc
acatcggcattgacatcagcattcacgatgcctgagattgtccagcgtctggcaagtatg
cttaactacaacctggagactcttgcgggaccaaagatgggccagctcaaggtgaataac
ccaaccaaataccacttccagccgagggttctgttgtcagactttatcgacatctacctc
aacttgggctcatcccaagcgttcatcgacgctgttgcctcggatggtcgctcgtacaag
ccggaggtatttgacaaggctaggttcatcctctcgaagcgcagtatgaaggaggccatt
gaactcgagcagctcgacacgttgatggccaagttcctcgagtcgaagcagcttgcagac
caggccgagctggaccttggagacatcccggccgaattcgaagacccgattatgggagat
ttgatgaaggatcccgtcatcctgccatcgaagcatattgttgatcggggaactattgtg
cagcacttgctgtcggatccgaaggatccctttacgcgacagccgatgacggtggatgat
gccatcccgcacactgagctgaaggagaagattcagaagtggagagaggaaaagattgcg
gcggccaaggccagagcgacgggcggcgatgcgatggatacaacggaaggctga
DBGET
integrated database retrieval system
