KEGG   Colletotrichum fioriniae: CFIO01_05269
Entry
CFIO01_05269      CDS       T04796                                 
Name
(GenBank) RNA polymerase M/15 kDa subunit
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03020  RNA polymerase
cfj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CFIO01_05269
  09124 Replication and repair
   03420 Nucleotide excision repair
    CFIO01_05269
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfj03021]
    CFIO01_05269
   03400 DNA repair and recombination proteins [BR:cfj03400]
    CFIO01_05269
Transcription machinery [BR:cfj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CFIO01_05269
DNA repair and recombination proteins [BR:cfj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CFIO01_05269
SSDB
Motif
Pfam: Zn_ribbon_RPB9 zf-C3HC4_3 ObR_Ig DUF7577
Other DBs
NCBI-ProteinID: EXF79902
UniProt: A0A010QIY9
LinkDB
AA seq 198 aa
MATPMSTNSQDDAANKKLEQITFRFCSECSNMLYPKEDEETHRLQFTCRTCQFTEEAQST
CVFRNVMNNAAGETAGVTQDVGSDPTVGDPQSVLAPVVCIGCGHAILCSGCGNPSDDFNV
SVAPTHQHDGPQSKKTEITWDDLMDMAEDEALDEYDEERESVTSDEINHGFAGIALNNEP
DSANRKVSWPTFQLAVSQ
NT seq 597 nt   +upstreamnt  +downstreamnt
atggcgacccccatgagcacaaactcccaagacgacgccgcgaacaagaagcttgagcag
attacctttcgcttttgctccgaatgctccaacatgctctaccccaaggaggacgaagag
actcatcgcctccagttcacctgccgaacctgccagtttaccgaggaggctcagtctacc
tgcgtcttccgcaacgtcatgaacaacgccgccggtgagaccgccggtgtcacacaggat
gtcggttcggatcctactgtaggtgatccccagtctgttcttgcccctgttgtatgcatc
ggctgcggccacgccatcctttgcagcggctgcggtaacccgtccgacgacttcaatgtc
tcggtggcccctacccaccagcacgacggtccccagagcaagaagacggagatcacatgg
gacgacttgatggacatggccgaagacgaggctctcgacgaatacgacgaagaaagggaa
tcggtcacctccgacgagatcaaccacggattcgcgggcatcgcgcttaacaacgagcct
gactccgccaaccggaaagtctcgtggcctacttttcagctggctgtcagccagtga

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