Colletotrichum fioriniae: CFIO01_05533
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Entry
CFIO01_05533 CDS
T04796
Name
(GenBank) SH2 domain-containing protein
KO
K11292
transcription elongation factor SPT6
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_05533
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_05533
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CFIO01_05533
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CFIO01_05533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
YqgF
Spt6_S1
Tex_central_region
SPT6_acidic
HHH_9
SH2
HHH_3
PSD4
DUF7800
Motif
Other DBs
NCBI-ProteinID:
EXF78593
UniProt:
A0A010S1Z8
LinkDB
All DBs
AA seq
1411 aa
AA seq
DB search
MSASMRDFVDGEAELDDEDEESVDEDADPRSARRRNAAPEDSSEEEEDDEDEEEARKIRE
GFIVDEDEEEEEGEDEDAHERKRKREHRDREEEERLDEDDLELIGEQIERRAPTQPKFKR
LKRGHRDEDERGPERRGLEDMFSDDDEEVNDQKPYGRSNYRPQADEFEDFIEEDYPEDED
ERARQQEDAEVARPRDRGVGGVVDTSGLDKDALEDMEAIFGNGEDYDWALQMEEEQEDRE
REEQVIELKDVFEPSQLKEKLLTDEDNQIRFTDEPERFQLDRKPFKHLQISAEQFKEEAR
WIAGLMWPKKLLQSELHGPFTKAIGKVLEFFVVDDVEVPYVFQHRKDYLIHAKKTKNPDH
RDDPDAPEWIVSADKLLTQDDLWRILELDIKFRSLIEKRNALEKTLENLKSTASIKDDVL
EDMIPQAATMEELQDLQDYLHFQYTNELKDLSFMNGNSNQTKRPGSKSNLVDRVRRSKAI
GFVRAYGITPDRFAQNTLREGNKVWADDDSQLPDDLADSLTDEEFQTGDTVMYAARQMYA
EELFVNPRMRKHFRVNFYQMGEISCRRTEKGLKKIDESHPFYEVKYLINQTIADVARQPD
LYLKMMKAEEEGLIEVKLTLENDEGFKRSLRQEFISDNYSELADRWNDERQKVLDLMVPR
LSKIIAKGVKESLRTACQEEVLKACREEYSKRLDQAPYKPKGMILGTLPRIITLSNGMAD
PARDPTLWASVEEDGRVIEQGKLGNLARDERAREEFVEIVNRRRPDAIGISGWSADTQKL
VRDLESLISEKGLMGPEFDDPELGEYRTEPLEVIVVNDEVARLYKDSPRAVAEHPTLSSL
TRYCIALAHYMQNPLKEYAALGKDIASLAFHPCQNLLPQEKLLKHLESAMVDMVNLCGVN
INEAVGDSYTANLLPYVAGLGPRKATSVIKAINANGGAVGSRDELVGDPDSGKLPVVGPR
VWNNCASFLFIDYDATNPASDPLDNTRVHPEDYELGRKMAADALELDEEDVKAETDHNGP
GAIVRKLFKEDEQEKVNELILEEYAEQLERNYSQRKRATLETIRAELQAPYEELRRNFSS
LGPNEIFTMFTGETKDTLAQGMIIPVNIRVVKDDFAIVKLDCGIEGRIESHDGPDGVRVR
GLLTTGQTVQAKVLEVNYKDFLAKLSAREAEVKRPYKRQLYHGHGQWDERLEAADKEELR
EKDKTTGRTQRVIKHPLFKPFNGLEAEQWLGTQAAGEVIIRPSSKGNDHLAITWKVADGV
FQHVDVLELQKETEFSVGKLLRVGGKLTYKDLDELIHEHIEAMSRKVDEMMQHEKFEKRS
KTDLEKWLTTYIDANPNRSAYAFCIDPKHPGYFWLCFKASRGSRVNSWPVRVIPGGFELL
KQRYPDMRALCNGFKIRYQTEITKMQKGGGR
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctcaatgcgtgactttgtcgacggcgaggccgagctcgatgatgaggatgag
gagtctgtagatgaggatgccgatcctagatctgcgcgcagaagaaatgcggcccctgaa
gactcctcggaagaggaagaagacgatgaagatgaggaggaagcgcgcaaaattcgcgag
ggattcattgtcgacgaagatgaggaagaggaagaaggcgaggacgaagatgctcacgag
cgaaagcgaaagcgagagcatcgcgacagagaagaagaagagcggctcgacgaggatgac
ttggaacttatcggggagcaaattgagcgcagagcaccaacacagcctaaattcaaacgt
ctcaaacgaggacatcgggacgaggatgaacgtggccccgagcgacgcggcttagaggac
atgttctccgatgacgacgaggaagtcaacgaccaaaaaccctacggccgatcgaactac
cgcccccaggccgacgagttcgaagacttcatcgaggaagattacccggaggatgaggac
gaacgagcgcgtcagcaggaagatgccgaagtcgcccggccccgcgacagaggagttgga
ggtgtcgtcgacacttccggcctcgacaaagacgccctggaggacatggaggcaatcttc
ggtaatggcgaggattacgattgggccctccaaatggaagaagagcaagaagaccgcgaa
cgcgaagagcaggttattgagctcaaggacgtgtttgagccttcacagttgaaggagaag
ctcttgaccgacgaggacaaccagatccgtttcacggatgagcctgaaagattccagctg
gaccgaaagcccttcaagcacttgcaaattagcgctgagcagttcaaggaagaggcccgg
tggattgcgggtttgatgtggcccaaaaaactgctccaatctgaactacacggacccttc
accaaggcgatcggcaaggtcctcgagttctttgtcgttgacgacgttgaggtcccctac
gtctttcagcatcgcaaggattatttgatccatgccaagaagaccaaaaatcccgaccat
cgcgacgacccagatgcccccgaatggattgtcagcgcagacaagcttcttactcaggac
gacttgtggcggattctggagcttgatatcaagttccgttcactgatcgagaagcggaac
gctctggaaaagacgctcgagaatctcaaatctactgctagcatcaaggacgatgtactc
gaggatatgattccccaagctgcgaccatggaagaattgcaagatttgcaggactacctc
cacttccagtacaccaacgagctcaaggacctgtctttcatgaacggcaatagcaatcag
acgaagcgcccaggctccaaatcaaatcttgtcgacagagtcaggaggagcaaggctatc
ggttttgtccgtgcctacggcatcactccggatcggtttgctcaaaacactcttcgcgag
ggcaacaaggtttgggccgacgacgacagtcagcttcccgacgacctcgccgactccctt
acggatgaagaattccaaactggtgatactgtgatgtacgctgctcgccagatgtacgca
gaggagctgtttgttaaccctcgtatgcggaagcacttcagagtcaacttctaccagatg
ggcgaaatcagctgtcgccggacagagaagggcttgaagaagattgacgagtcacatcca
ttctacgaggtcaagtacctcatcaaccagacaatcgccgacgttgctcgccagccagat
ctctacctcaagatgatgaaggcagaggaagaaggtctcatcgaggttaagctgacgttg
gagaacgacgagggcttcaagcgctcattgcgtcaagagttcatttcagacaactacagt
gaactcgcggatcgatggaacgatgaacgtcagaaggtacttgatctcatggttccccga
ctttccaagatcattgccaagggcgtcaaggagtctctccggactgcatgccaagaagaa
gttctcaaagcctgccgcgaagaatactcaaagaggctcgatcaagcaccatataagccc
aagggtatgattcttggcacactgccccgaatcatcactctgtccaacggaatggccgat
ccagctcgcgaccctacactttgggcgtccgttgaggaagatggccgggtcattgagcag
ggaaaactgggcaatttagctcgtgacgagcgagctcgcgaagaattcgtcgagatcgtc
aacaggcgtcgcccggatgccatcggtattagcggatggtctgcagatactcagaagctt
gtgagagacttggaaagtctaatcagcgagaagggcttgatggggcctgagtttgatgac
cctgagcttggggagtaccgcactgagcctctcgaagtcatcgtggtcaatgacgaggtg
gctcgtctctacaaggacagtccccgagcagtcgctgagcaccctactctcagttccctt
acaaggtactgcatcgctttggcgcactacatgcaaaaccctctcaaggagtatgcggct
cttggcaaagacattgcatcgttagctttccatccttgtcaaaacctgctaccccaagag
aagctactcaaacaccttgagtcagcgatggttgacatggttaacctgtgtggtgtcaac
atcaacgaggctgtgggcgattcttacacagcgaacctcctaccctatgtggccggtctt
ggcccccgaaaggctacaagcgtcatcaaagccatcaacgcgaacggaggagctgtcggc
agcagagatgagctggttggtgaccccgacagtggcaagctgccagtcgtgggcccaaga
gtctggaacaattgcgccagtttcctcttcatcgactacgatgcgaccaaccccgcctca
gacccccttgacaacacccgcgttcacccggaagactacgagctgggtcgcaagatggca
gccgacgcccttgaacttgatgaagaggacgtcaaagcggagacggatcacaatggacct
ggtgctattgttcgaaaactcttcaaggaagacgaacaagagaaggttaatgagcttatc
ctcgaggagtatgcagaacaacttgagcgcaattacagccagcggaagcgcgctacgctc
gagacaattcgggctgagcttcaagccccctacgaagagttgcgcagaaacttctcaagc
cttggtccgaacgagattttcacaatgttcaccggcgagaccaaggacacactcgcccag
ggcatgatcatccccgtcaacatccgggtggtgaaagatgacttcgccatagtgaagctt
gactgcggcatagagggccgtatcgagtcgcacgatggccccgacggtgtccgtgtcaga
ggtcttctcacaaccggacagacggtgcaagccaaggtgcttgaggtaaactacaaggac
ttcttggccaagctctctgcaagagaagccgaagtcaagcgcccgtacaagcgccaattg
taccacggccatggacagtgggacgagagactggaggcagccgataaggaagaactccgc
gaaaaggacaagaccaccggacgcactcaaagagtcattaaacacccgcttttcaagccg
ttcaatggattggaagctgagcaatggcttggtacccaagcggccggagaggtcatcatt
cgaccttcctcaaaaggtaacgaccatctggctatcacctggaaggtcgccgatggtgtt
ttccaacatgtcgacgtgcttgagctccaaaaagagacggagttttccgtcggcaagctt
ctcagggttggtggcaagctcacctacaaggatctggatgagttgatccatgaacacatc
gaggctatgtctcgcaaggtggacgagatgatgcagcatgagaagtttgagaagcggtcc
aagacggatctcgagaaatggctcaccacatatatcgatgccaatcccaaccggtccgcg
tatgcgttctgtatcgatcccaagcatcccggctatttctggctttgcttcaaggcgagt
cgtggatctcgtgtcaactcgtggcctgttcgtgttattccgggcggcttcgagctactt
aagcagaggtaccctgacatgagagcgctgtgcaacggcttcaagatccgttaccagacc
gaaatcaccaagatgcagaagggcggtggtagatag
DBGET
integrated database retrieval system
