Colletotrichum fioriniae: CFIO01_05825
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Entry
CFIO01_05825 CDS
T04796
Name
(GenBank) DNA mismatch repair protein msh-2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFIO01_05825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_05825
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CFIO01_05825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
AAA_22
Motif
Other DBs
NCBI-ProteinID:
EXF73999
UniProt:
A0A010R8H7
LinkDB
All DBs
AA seq
921 aa
AA seq
DB search
MSSRPELKVDDEHGFIRFFKSLPAVHEDTVRIFDRGDWYTSHGEDANFIARTVYKTTSVV
RTLGRDEKTGLASVTMTVTVFRQFLREALFKLGKRIEIWESTGGRMNWKVVKQASPGNLQ
DVEEDLGGQIEAAPMMLAVKISTKASEARSVGVCFADASVRELGVSEFLDNDLFSNFEAL
LIQLGVRECLVQTDKADKNKDPDLAKLKQIIVNCGVAVSERSAGEFGTKDIEQDLARLLK
DERATTLLPQTDLKLAMGSAAALIKYLGVLHDSSNFGQYQLYQHDLSQFMKLDAAALKAL
NLMPGARDGAKSMSLYGLLNHCKTPVGSRLLSQWLKQPLMSKEEIEKRQQLVEAFVNDTE
LRQTMQEEHLRSVPDLYRLAKRFQRGKANLEDVVRAYQVIIRLPGFLGTLEGVMDEAYRD
PLDEAYTTAFRELSNSLAKLSEMVETTVDLDALDNHEYIIKPEFDDSLRIIRKKLDKLKR
DIDQQFSDAARDLKQEVGKKIFLENHKVHGYCMRLTRQEAGAIRNKSGYQECSTQKNGVY
FTTKTLQSLRREFDQLSQNYNRTQSSLVNEVVGVAASYCPVLERLAGILAHLDVIVSLAH
CSVHAPSEYVRPKIHKRGEGQTILKEARHPCLEMQDDVQFITNDVTLTRDKSSFLIITGP
NMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEML
ETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTAL
ADDHPQVHNLHVTAHIGGGGGENSKREVTLLYKVDDGVCDQSFGIHVAELVRFPDKVVRM
AKRKADELEDFTSKHEDLGLKYSKTDIEEGSALLKEVLLKWKEEVAAGQMSKEEMVSKLK
GLVMADEKLLANPFFQSVKTL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccggccggaattgaaggtcgacgatgaacacggcttcattcgcttcttcaag
tcgctcccggccgtccacgaagatacagtccgcatattcgaccgaggcgactggtacaca
tcacatggcgaagatgccaacttcattgcccgcacagtctacaagacaacatccgtcgta
aggacacttggccgcgatgagaagacggggctcgcctcagtgacaatgactgtcacagta
tttcgacaattccttcgagaagcactgttcaagctgggcaagagaatcgagatatgggag
agcaccggcggccgcatgaactggaaggttgtcaagcaagcttcgcctggcaacctgcag
gacgtggaggaggacctgggtggccagattgaggcagcaccgatgatgcttgcagtcaag
atctcaacaaaagcctcggaggcccggagtgtgggtgtttgcttcgccgatgccagtgtg
cgagagctgggtgtcagcgagttcctcgacaacgacctcttctccaacttcgaggccctt
ctcatccagctcggtgtcagagagtgtcttgttcagacagacaaggcggataagaataag
gatcccgatctggcgaaactgaagcagatcatcgtcaactgtggcgtagccgtctcggag
cggtctgctggtgaattcggcaccaaggatatcgagcaggacctggcacgtcttttgaag
gacgaacgcgccaccactctcctcccacaaaccgacctcaagttggccatgggatcagcc
gcggctcttatcaagtacctcggcgttctccacgattcgtccaactttgggcagtaccag
ctgtaccagcatgacctctcacagttcatgaagctggatgcagcggcgctcaaggctctc
aacttgatgcctggcgcccgcgacggtgccaagtctatgagtttgtacggtctgctgaat
cactgcaagacacctgtcggtagcagattgctgtcgcaatggctcaagcaaccccttatg
agcaaggaggaaatcgagaagcgccaacagctcgtcgaggcattcgttaacgacactgag
ctgcggcagactatgcaagaggagcaccttcgctcagtcccggatctataccgccttgcc
aagcgattccaaaggggcaaggcaaacctcgaggacgttgttcgtgcgtaccaggtcatc
atccgtctccccgggttcttgggaaccttggagggtgtcatggacgaagcctacagagat
cctctcgatgaagcctacacaaccgcttttcgtgagctttccaatagtcttgcaaagctc
tcggagatggtggaaaccacggtcgacttggatgcgctcgacaaccacgagtatatcatc
aagccagagttcgatgacagcttgagaattatcaggaagaagctcgataagctcaagagg
gatattgatcaacaattctcggatgccgcgcgcgacttgaagcaggaagtcggcaagaag
atctttctcgaaaaccacaaggtccacggctactgcatgagactcacgagacaggaagcc
ggtgcgatccgcaacaagtcaggataccaggaatgttcaacacagaagaatggtgtctac
ttcacaacgaagaccctgcaaagtcttcgccgcgagttcgaccagctgtcgcagaactac
aacagaacccagagcagtctggtcaacgaggttgttggcgtagccgcttcgtactgccca
gtcctggagagacttgctggtatcctggcacacttggacgtcatcgtttccctcgcacac
tgctcagtccatgcaccttcggaatacgtccgacccaagattcacaagcggggcgaaggc
cagacaatcctaaaggaggctcgacacccgtgtctggaaatgcaagacgacgtacagttc
atcacgaacgacgtcactttgactcgtgacaagtcttcattcctcatcatcactggcccc
aacatgggcggaaagtcgacatacatccgccagatcggcgtcatcgccctcatggcccag
attggctgcttcgtcccctgcagcgaggccgagctaaccatcttcgactctatcctggcg
cgtgttggtgccagcgactcccaactcaagggcgtgtccaccttcatggcggaaatgctc
gagacggctaacattctcaaatcggcaacggccgaatcgctcatcatcattgacgagctt
ggtcgcggcacatcaacgtacgacggcttcggtctcgcgtgggccatttctgaacatatt
gtcaaggagattggctgcttcgcaatgttcgcgacgcacttccacgagctgacggccctg
gcggacgaccatccgcaggtgcacaacctgcacgtcaccgcgcacattggcggcggcggc
ggcgagaacagcaagcgtgaggtgacgttgctgtacaaggtcgatgatggtgtttgcgac
cagagcttcggcattcacgtggcagagctggtccggttccccgacaaggtcgtgcggatg
gcgaagcgcaaggctgacgagctggaggactttacgtccaagcacgaggacctggggctc
aagtacagcaagacggatatcgaggagggcagtgcgctgctcaaggaggtgctgctcaag
tggaaggaggaggttgccgctgggcagatgagtaaggaagagatggtctccaagctcaag
gggctcgtcatggcggacgagaagctgcttgcgaacccctttttccagtctgtcaagact
ttgtga
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