Colletotrichum fioriniae: CFIO01_06180
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Entry
CFIO01_06180 CDS
T04796
Name
(GenBank) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfj03041
]
CFIO01_06180
Spliceosome [BR:
cfj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CFIO01_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
TPR_14
Motif
Other DBs
NCBI-ProteinID:
EXF86543
UniProt:
A0A010SNP4
LinkDB
All DBs
AA seq
590 aa
AA seq
DB search
MSDYDHFGSSEEESAEIKKLQADVEVDPDNFETWEKLVRACEGLEGGLNRNSSPQALATL
RDAYDRFLLKFPLLFGYWKKYADLEFNIAGPESAEMVYERGCASITNSVDLWTDYCSFKM
ETTHVPHLVRELFERGATCVGLDFLAHPFWDKYIEYEERQEAQDKIFAILSRVIHIPMHQ
YARYFERFRQLSHSRPVTELVPAETLQRFQAEVEAESAQYAGAQRTELEVERDVRTKIDA
MYYEYFTQTQSETNKRWTYESEMKRPYFHVTELESSQLTNWRKYLDFEESEGNTTRIVFL
YERCLVTCAFYDEFWFRYARWMSAQEGKEEEVRIIYQRAATMFVPISRPGIRLQFAYFEE
SCGRIDIARDIHASILMKLPDCIEAITSWAHLQRRQSGLDAAVEVFKAQIDSPQVDIFTK
AALVTEWALFLWRVKGSVEEARNVFLKNVQWYADSRVFWDKWLEFELQQATSTELEDQHG
DRIKQIFDELRSKSRLSASTKKELYQIYLSYLQQRGGKDAMKQFLAIDREIFGPGSISLL
AKDKVGGKENGAAVAELDEVTRYRAEARYLRYYELQGEPDLEGQATAPFN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatgaccactttgggagctccgaggaggagagcgccgagatcaagaagctc
caggccgatgtggaagtcgatcccgataacttcgagacctgggagaagctggttcgcgct
tgcgagggtctggagggcggcctgaaccgcaactccagccctcaggcccttgctactctt
cgagatgcctacgatcgcttcctcctcaaattccctctgctctttggctactggaagaaa
tacgccgacctcgagttcaacattgctggacccgagtcagcagagatggtctacgagcga
ggatgcgccagcatcaccaattctgtcgacttgtggaccgactactgctccttcaaaatg
gagaccacccacgtcccacacctcgtcagagagctctttgaacgcggcgcaacctgtgtc
ggccttgacttcctcgcacacccgttctgggataagtacatagagtacgaggagcgacag
gaggcccaagacaaaatctttgccatcctgtctcgagtcatccacattccgatgcaccag
tatgctcgttactttgaacgattccgccagctctcccacagccgccccgtcaccgagctg
gttccggctgagacgctgcagagattccaggccgaggtggaagccgagagcgcccagtat
gccggtgcgcagcgaacggagctcgaggttgaacgcgacgtccgcaccaagattgacgcc
atgtactatgagtactttactcagacgcagtctgagaccaacaagcgatggacctacgag
tccgaaatgaagcgcccttacttccatgttacggagcttgagagctcgcagctcaccaac
tggcgcaaataccttgactttgaagagtccgaggggaatactacccgcatcgtctttctt
tatgagcgatgcttggtgacgtgcgctttctacgatgaattctggttccgctacgcccgc
tggatgtccgcacaagagggcaaagaggaagaagtcaggatcatctaccagagagccgcc
accatgttcgtacccatcagccggcccggcatcagactgcagtttgcctactttgaggaa
agctgtggacgtatcgacatagctcgcgatattcatgcatccatccttatgaagttgccc
gactgcattgaggccatcacctcatgggctcacctccagcgtcgacagagtggactggac
gccgcggttgaggttttcaaggcgcagatcgattcgcctcaagtggatatctttaccaag
gcagctctggtcaccgagtgggcgttattcttatggagggtcaagggctcagtggaagaa
gcacgcaacgtcttcctcaagaacgtacagtggtacgccgacagccgcgtcttctgggac
aagtggctcgaattcgagcttcagcaggcgacaagcacggagctggaggatcagcacggc
gaccgcatcaagcagatctttgacgaactccggagcaagagccgtttgtccgcttcaaca
aagaaggagctgtatcagatttacctatcgtatctgcagcagcggggcggtaaagacgcg
atgaagcagttccttgccattgatcgggaaatctttgggccaggttcgatctcactgctg
gccaaggacaaggttggcggaaaagagaacggagctgccgtggctgagttggacgaggta
acaagataccgagccgaagccaggtatctgagatactacgagctccagggcgagccagac
ctcgagggacaggccacagcgccattcaactaa
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