Colletotrichum fioriniae: CFIO01_06494
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Entry
CFIO01_06494 CDS
T04796
Name
(GenBank) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03013
Nucleocytoplasmic transport
cfj03015
mRNA surveillance pathway
cfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CFIO01_06494
09122 Translation
03013 Nucleocytoplasmic transport
CFIO01_06494
03015 mRNA surveillance pathway
CFIO01_06494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_06494
03041 Spliceosome [BR:
cfj03041
]
CFIO01_06494
03009 Ribosome biogenesis [BR:
cfj03009
]
CFIO01_06494
03012 Translation factors [BR:
cfj03012
]
CFIO01_06494
Enzymes [BR:
cfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CFIO01_06494
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CFIO01_06494
mRNA cycle factors
Stress granule specific factors
CFIO01_06494
Spliceosome [BR:
cfj03041
]
Complex C
Other components
EJC/TREX
CFIO01_06494
Ribosome biogenesis [BR:
cfj03009
]
Eukaryotic type
90S particles
Helicases
CFIO01_06494
Translation factors [BR:
cfj03012
]
Eukaryotic type
Initiation factors
eIF-4
CFIO01_06494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
COG4_N
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
EXF74817
UniProt:
A0A010Q4N1
LinkDB
All DBs
AA seq
401 aa
AA seq
DB search
MAEGSGIDRKAEERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIVQ
VCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGD
YMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADE
LLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGL
KQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDM
PQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRF
GRKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLIS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggaagcggaatcgatcgcaaggcggaggaaaggatggagttttcgacctct
aaggaagtgacggtccacccgacctttgagtccatgtctctcaaggagaacctcctccgc
ggaatctatgcctatggttacgagtccccctcggccgtgcagtcccgcgccatcgtccag
gtctgcaagggtcgcgacaccatcgcccaggcccagtccggtacgggtaagacggccacc
ttctcgatcagcatgctccaggttatcgacacggcggtgcgcgagacccaggccctcgtc
ctttccccgacccgcgaactcgcgactcagattcagtccgtcgtcatggcccttggcgac
tacatgaacgtccagtgccatgcctgcatcggcggcactaacgtgggcgaggatattcgc
aagcttgactacggccagcacatcgtctccggcacccctggccgtgttgccgatatgatc
cgtcgccgtcacctccgtacacgccacatcaagatgctcgttctcgacgaggccgacgag
ctcctcaaccgcggattccgcgagcagatctacgacgtctaccgatacctaccccccgcg
actcaggtcgtcgtcgtcagcgccacccttccgtacgatgtcctcgacatgacgaccaag
ttcatgaccgatcccgttcgtatcctcgtcaagcgtgacgagttgaccctcgaaggattg
aagcagtacttcatcgccgtcgaaaaggaggactggaagtttgataccctttgcgatctt
tacgacaccctgaccatcacccaggccgtcattttctgcaacacccgcagaaaggtcgac
tggttgacggacaagatgcgcgaggccaacttcaccgtcagcagtatgcacggtgacatg
ccgcaaaaggagcgcgacagcattatgcaggacttccgacagggcaacagccgtgtgctc
atctcgactgatgtatgggcgcgtggtatcgacgtccagcaggtcagtttggtcatcaac
tacgacttgccgagcaaccgtgagaactacatccaccgtattggtcgcagtggtcgcttt
ggacgcaagggtgttgccatcaacttcgttactagcgaagatgtgcgcattttgcgggac
attgagttgtactactctacccagatcgacgagatgcccatgaacgtggccgatctcatc
tcttaa
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