KEGG   Colletotrichum fioriniae: CFIO01_06494
Entry
CFIO01_06494      CDS       T04796                                 
Name
(GenBank) ATP-dependent RNA helicase FAL1
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03013  Nucleocytoplasmic transport
cfj03015  mRNA surveillance pathway
cfj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CFIO01_06494
  09122 Translation
   03013 Nucleocytoplasmic transport
    CFIO01_06494
   03015 mRNA surveillance pathway
    CFIO01_06494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfj03019]
    CFIO01_06494
   03041 Spliceosome [BR:cfj03041]
    CFIO01_06494
   03009 Ribosome biogenesis [BR:cfj03009]
    CFIO01_06494
   03012 Translation factors [BR:cfj03012]
    CFIO01_06494
Enzymes [BR:cfj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CFIO01_06494
Messenger RNA biogenesis [BR:cfj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CFIO01_06494
   mRNA cycle factors
    Stress granule specific factors
     CFIO01_06494
Spliceosome [BR:cfj03041]
 Complex C
  Other components
   EJC/TREX
    CFIO01_06494
Ribosome biogenesis [BR:cfj03009]
 Eukaryotic type
  90S particles
   Helicases
    CFIO01_06494
Translation factors [BR:cfj03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    CFIO01_06494
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Cas3-like_C_2 AAA_30 AAA_22 TniB COG4_N Flavi_DEAD
Other DBs
NCBI-ProteinID: EXF74817
UniProt: A0A010Q4N1
LinkDB
AA seq 401 aa
MAEGSGIDRKAEERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIVQ
VCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGD
YMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADE
LLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGL
KQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDM
PQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRF
GRKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLIS
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggcggaaggaagcggaatcgatcgcaaggcggaggaaaggatggagttttcgacctct
aaggaagtgacggtccacccgacctttgagtccatgtctctcaaggagaacctcctccgc
ggaatctatgcctatggttacgagtccccctcggccgtgcagtcccgcgccatcgtccag
gtctgcaagggtcgcgacaccatcgcccaggcccagtccggtacgggtaagacggccacc
ttctcgatcagcatgctccaggttatcgacacggcggtgcgcgagacccaggccctcgtc
ctttccccgacccgcgaactcgcgactcagattcagtccgtcgtcatggcccttggcgac
tacatgaacgtccagtgccatgcctgcatcggcggcactaacgtgggcgaggatattcgc
aagcttgactacggccagcacatcgtctccggcacccctggccgtgttgccgatatgatc
cgtcgccgtcacctccgtacacgccacatcaagatgctcgttctcgacgaggccgacgag
ctcctcaaccgcggattccgcgagcagatctacgacgtctaccgatacctaccccccgcg
actcaggtcgtcgtcgtcagcgccacccttccgtacgatgtcctcgacatgacgaccaag
ttcatgaccgatcccgttcgtatcctcgtcaagcgtgacgagttgaccctcgaaggattg
aagcagtacttcatcgccgtcgaaaaggaggactggaagtttgataccctttgcgatctt
tacgacaccctgaccatcacccaggccgtcattttctgcaacacccgcagaaaggtcgac
tggttgacggacaagatgcgcgaggccaacttcaccgtcagcagtatgcacggtgacatg
ccgcaaaaggagcgcgacagcattatgcaggacttccgacagggcaacagccgtgtgctc
atctcgactgatgtatgggcgcgtggtatcgacgtccagcaggtcagtttggtcatcaac
tacgacttgccgagcaaccgtgagaactacatccaccgtattggtcgcagtggtcgcttt
ggacgcaagggtgttgccatcaacttcgttactagcgaagatgtgcgcattttgcgggac
attgagttgtactactctacccagatcgacgagatgcccatgaacgtggccgatctcatc
tcttaa

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