Colletotrichum fioriniae: CFIO01_06552
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Entry
CFIO01_06552 CDS
T04796
Name
(GenBank) DEAD/DEAH box helicase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_06552
03041 Spliceosome [BR:
cfj03041
]
CFIO01_06552
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_06552
Enzymes [BR:
cfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CFIO01_06552
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CFIO01_06552
mRNA cycle factors
Common to processing body (P body) and stress granule
CFIO01_06552
Spliceosome [BR:
cfj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CFIO01_06552
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CFIO01_06552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
EXF85038
UniProt:
A0A010SJL0
LinkDB
All DBs
AA seq
620 aa
AA seq
DB search
MSRLPPAEMSSFDTADMQSALPTDGKKAPAAAVNSDGTKWAEPLPYNYDELAQQGPEAVT
EWAGNGAVYEWDEEFGDVGPKFPDLELALFGDSNSRIASNSGLDFSVISSVEVTQEGEIR
VEPVHSYKDAGLHPVMLENIELCGYEAPTPIQKYTLPAIHKGLDVVAIAQTGKKGSGKTA
AYLIPILNKLMGKAKKLAAPRPNPAEIALGQQWVRAEPLVVIVCPTRELAIQIFNEARKF
CYRTMLRPCVAYGGGPLRDQIQQLGKGCDVLIASPGRLVDFIQRPDTLSLKRLRYMVFDE
ADEMLHDDWREEMDVIMTGGEQQEGNIKYMLFSATFPKPLRDLAKENLSSSSVRINIGRI
GSTHTNILQRVFKFDAFEKKEALKDQINSLPACRTIIFVNQKRACDDLDDFLFNLGFPCT
SMHADRTQLEREASMRAFRTGKSPILIATGISARGIDVKNVNHVINFDLPSLDHGGIEEY
THRIGRTGRMGQRGIATSFYTDRDEPMASVLVRTLLETKQEIPDFLEPFKPTGKGLENLK
FETESDFDPEEAGIAHLGGESGGWSNEGGGGDAGGDGSWGATGGDSGWGGGGDSAGNDTK
QEEPEAAPAWGASSGGGGSW
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacttcctcccgctgagatgtcttccttcgacactgccgatatgcagtcggct
cttcctaccgatggcaagaaggcccctgccgctgctgtcaacagcgatggtacgaagtgg
gctgaacctctgccctacaactacgacgagcttgcccagcagggtcccgaggctgtgact
gagtgggctggcaacggtgccgtttacgagtgggatgaggagtttggcgatgttggcccg
aaattccccgacctcgagctggctctcttcggtgattccaactcccgcattgcctccaac
tccggcctcgacttctccgtcatctcttctgtcgaggttacgcaggagggtgaaatccgt
gtcgagcctgtccactcctacaaggacgctggcttgcaccccgtcatgttggagaacatt
gagctttgcggctacgaggcccctacccccatccagaagtacacccttcccgccattcac
aagggtctcgacgttgtggctatcgctcagaccggcaaaaaaggctccggcaagaccgct
gcttacctcattcccatcttgaacaagctcatgggcaaggccaagaagctcgccgcccct
cgccccaaccctgccgagattgctcttggacagcagtgggttcgtgcagagcctctggtg
gtcatcgtttgtccaactcgcgagttggcaatccagatctttaacgaggctcgcaagttc
tgttacagaaccatgcttcgcccttgtgtcgcctatggtggtggtcccttgagagaccag
atccagcagcttggaaagggctgtgatgttctcatcgcgtcccctggtcgtctggtcgac
ttcatccagcggcccgacactctctcgctcaagcgcttgagatacatggtcttcgatgag
gctgacgagatgcttcacgatgactggcgggaggagatggatgtcatcatgactggcggt
gaacagcaggagggaaatatcaagtacatgctgttttcggctaccttccccaagccgctc
cgcgatctcgcgaaggagaacctgtcttcctccagcgttcgcatcaacatcggtcgcatt
ggaagcacccacaccaacattcttcagcgtgtcttcaagttcgacgctttcgagaagaag
gaggctctcaaggaccagatcaactccctccctgcctgccgcacaatcatcttcgtcaac
cagaagcgtgcttgcgatgacttggatgatttcttgttcaatcttggcttcccttgcacc
tcgatgcatgctgatcgcactcagcttgagcgtgaggcttctatgcgcgctttccgtact
ggaaagtctcccatccttattgccactggcatcagcgctcgcggcattgacgtgaagaat
gtcaaccacgtcatcaacttcgacctgcccagcttggatcacggtggcattgaggagtac
acccacagaatcggccgcaccggtcgtatgggtcagcgtggcattgcgacttccttctac
actgaccgtgatgagcccatggctagcgttctcgttcgcaccctcttggagaccaagcag
gagatccctgacttcctcgagcctttcaagcccactggcaagggcctggagaacctcaag
ttcgagactgagagcgacttcgaccctgaggaggctggcattgctcaccttggcggcgag
agcggtggctggtccaacgagggcggcggtggcgatgctggaggcgatggctcctggggc
gctactggaggcgactctggttggggtggtggcggcgattctgccggcaatgataccaag
caggaggagcccgaggccgctcccgcttggggcgcttcttctggcggtggtggttcttgg
taa
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integrated database retrieval system
