Colletotrichum fioriniae: CFIO01_06598
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Entry
CFIO01_06598 CDS
T04796
Name
(GenBank) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CFIO01_06598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_06598
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_06598
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CFIO01_06598
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CFIO01_06598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
Pfc11_Clp1_ID
VHS
zf_PCFS4
UBZ_FAAP20
Motif
Other DBs
NCBI-ProteinID:
EXF80997
UniProt:
A0A010QLR5
LinkDB
All DBs
AA seq
702 aa
AA seq
DB search
MSYESSATEVAEDYRQALEDLTTNVRFEISNLTMIAREQTEHAQVISEVLQDHILKAPAH
KKLPALYVLDSIVKNVGTPYTLFFGAKLYQTFMEAYAAVDGQVRRKMDEMLRTWKEPVPG
SLDKRPVFASEVTAPIESALIKARTSALQAQQGRPAGRGRPAAAPYRETPTPPGMRPGSN
QPMPYGQPPPMPQANGNRPPSAPLPPHPQMAPYAPPPPSYSAQPSAAPGPYQPPPQMPYG
AGLSGPPQAAGINKDSLGQDIQKLIDASKLEFAQNPHDHSIQQRLKALLDVQSLLQHQNL
PQDQLVLIKNQVADLAVKVRPFSAQSSTPTATTVPHHPPPPPAAPVVPSGLPQQQAGVTL
DALLGQGALAALLSRQSATPQLSTPPPPPHASMAIRSPPPQRTEPQRQPSAPPATDPMAL
LAGLRQAGILRGAAPSATPTPAAPAPVPPPGMPMMPPGFLPPNIASLLASGQLPPIPPLG
GMSGNQLDAVALKQQFQPHLIPSLFEQLGPQCTQCGRRFKTDDEGRKKKMAHMDWHFKAH
QRLAEAEKRGQHRSWYVDNNDWLKSREAIDVDHVATADKSSSSPGRGKKEAKPRYIPVPD
ASSGINSKCPICQEKFENKWLETAQEWVWLDTTLVGNRAYHFSCHSEATQARESTPVYTK
RAPEPSHGKKRKAEGDQKPFRGKMKKDKDKDTVKWPKAELDY
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgagtcatccgccacagaggtcgctgaggactatcgtcaagctctcgaagac
ttgactaccaatgtgcgattcgaaattagcaatctgacgatgattgcaagagagcagact
gagcatgcccaagtcatctctgaagtcttgcaggaccatatcttgaaggcgccagcgcac
aagaagctcccagccctctacgtcctcgattcgatcgttaagaatgtcggcactccgtac
acattgttcttcggagcaaagctataccagacattcatggaagcatacgcggctgtcgat
ggtcaggttcgccgcaaaatggatgaaatgctccgcacctggaaggagcctgttcctgga
tctctggacaagcgtccagtctttgcgtcagaagtgacggcacctattgagagcgccctc
atcaaggctcgcacatccgcgcttcaggctcagcaaggaagaccagcgggtcgcggccga
cctgctgctgcaccgtaccgcgaaacaccaacgccgccgggcatgcgacctggctcgaac
cagccgatgccttacggtcaacctccgcccatgccacaagcgaatggaaaccgacctccg
agtgcgcctctcccaccccatccgcagatggctccttatgctcctcctccgccgtcctac
agtgctcagccttcggcagctcctggtccctaccaaccccctccgcagatgccatacgga
gccggactttcaggacctcctcaggctgctgggataaacaaagactctttgggtcaagat
atccagaagttgatcgatgcgtcgaagttggagtttgcgcagaacccccatgatcatagt
attcaacaaagactcaaggcgttgttggatgtgcagagcttgcttcaacatcagaacttg
ccccaggaccagttggtcctcattaagaatcaagtagccgatcttgccgtaaaagtgagg
ccgttctcggcccaaagctcaacccctactgctacaactgtccctcatcatccaccgccg
ccacctgcggcgcctgtagtaccgtctggcctgcctcagcagcaagctggagtgacgctt
gatgccctcttgggccaaggagctcttgctgccctgttgtcacgacagtcagccacgccg
cagctttcaacgccgccacctcctcctcatgctagcatggcgatccggtctcctccccca
cagaggaccgagccgcaaagacagcccagtgcgccgccggcgacagatcccatggcattg
ctggccggcttacggcaagctggaattcttcggggagcagccccaagcgcaacgccgaca
ccagcagccccagcaccagtgcctcctccagggatgcctatgatgcctcccggattcttg
ccccctaacattgcaagcttgctggcttccggccaactgccaccgattcctccacttggg
ggtatgagcggcaaccagcttgatgcggtggccttgaaacaacaattccagcctcatttg
atcccgtctctctttgagcaattgggtcctcaatgcacccagtgtggtagacgtttcaag
acggatgatgagggaaggaagaagaagatggcgcacatggattggcacttcaaggcacac
caacggcttgcagaagcggagaaacgaggccagcaccgaagttggtatgtcgataacaat
gactggctcaagtcacgagaggccatcgatgtcgaccatgttgcgactgcggacaagtct
tcgtctagtcctggccgagggaagaaagaggccaagcctcgatacattcctgtgccagat
gcatccagcgggatcaatagcaaatgtcccatctgccaagagaagttcgagaacaagtgg
cttgagactgctcaagaatgggtgtggctggatactacactggtcggcaatcgagcatat
cactttagctgtcattcggaagcgacacaagcacgcgagagcacaccagtctatacgaag
agagcgcctgagccatcgcacggcaagaagcgcaaagcagagggtgaccaaaaaccgttt
cgcgggaagatgaagaaagataaagacaaagatactgtgaaatggcccaaggcggagctt
gactactga
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integrated database retrieval system
