Colletotrichum fioriniae: CFIO01_06898
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Entry
CFIO01_06898 CDS
T04796
Name
(GenBank) WD domain-containing protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CFIO01_06898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfj03009
]
CFIO01_06898
Ribosome biogenesis [BR:
cfj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CFIO01_06898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Cytochrom_D1
Beta-prop_Nup120_160
DUF7165
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
Motif
Other DBs
NCBI-ProteinID:
EXF85592
UniProt:
A0A010QZA4
LinkDB
All DBs
AA seq
1046 aa
AA seq
DB search
MPHSEQEGPLVKRQKLTVASKPATATRKSSRIFAPFRTVGLVSPTNVPFTSIPLGKMTFQ
ITTSVGRALQTYDLKRGLNLVFVTRPQTPADITTTLAWKDKVFAAWGDARKGEKQGLWAF
KRGKKVEELELPEDLNEPIQQILIFGSWIVGCAVTRLEVWKSATLEHYTTLYTMAGKSGA
NEITGGVTNMPTYLNKIFVGRKDGWVEIWNVSTGKLIYTILPPTPDCGAVTCMQPTTALS
LLAIAYANGNLVIQNILTDKPIIQLKAGHDDEPVTSISFRSDGMGAGHDGRKDGVMATAT
AATGDVTFWDLNNGGRVMGVLRSAHNPPSGDGPLVRGGISKIEFLSGQPVVVTSGRDNAL
KTWIFDETPFSAIPRILHQRSGHAAPVKCLEFLPSDFDGADAGNKWLLSGGQDRSLWGWS
MRRDGQSTELSQGNIRRMAKKTGILSAKAMARGPTTTLEDLKAPEITCIASSLNRDGGIG
ALPGNQPIWQKHRENKKKLDAEVSGSTGWESVVTAHKDDAWARTWFWGRKRAGRWAFPTG
DGSFVSTIAISPCGTFALVGSVEGSIDMYNLQSGIHRQRFPSKLTPAQARALKIQQLKQA
DDVVQLHTEKSSGFAPGTGRHTKAVTGIVVDSMNKNVITCSLDGKIKFWDFVTGNLVHQI
NWAPMAAITGCRYHAANDLMAFTCDDNSVRVVDLETKRTIREFWGCQGTINDFCFSNDGR
WIIAASQDCVVRIWDLPTSHLIDAIRLEKPCTALAMSSSGEYLAATIENELGVAIWTNKS
LFTHVPTRQISDKEAALLTGPTTSGEGNEGLLEAAFTEDGDADAEDETVVAPTVDQLSAE
LTTLSLVPKSRWQTLLHLDLIKQRNKPTEAPKAPEKAPFFLPSVGAGKQPQQQSLIEGAV
APEADAATEAKSRITKLERGRMQEAFTSKLDDGAASGDFDEFITHLKSLSPSTADLELRS
LSPEDGGLLNFIRALTSRLAARRDYELVQAWMTVFLRLHFDLVMADAELLEALGEWKTLQ
AREAGRLDDLVGYCSGVVGFLRSPRT
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgcctcactcggagcaagaagggcctctggtcaagcgacagaagcttactgtcgcctcc
aagcctgccacggccacacgtaaatcctcgcgcatctttgcgcctttccgaactgtcggc
ctcgtctcccccacaaacgtccccttcacttcgattccccttggaaagatgacttttcaa
atcacgacatccgtcggaagagcccttcagacctacgatttaaagagaggtctcaacctg
gtcttcgtcactcgtccccagaccccagccgacatcaccacgacgctcgcatggaaggac
aaggtcttcgccgcatggggcgacgccaggaagggtgagaagcaaggcctctgggcattc
aagcgtggaaagaaggttgaggagctcgagctccccgaagacctcaacgaacctatccag
cagatcctcatcttcggctcctggatcgttggatgcgctgtgacgagactcgaggtttgg
aagtcggccaccctggagcactacaccacactctacaccatggctggcaagtccggcgcc
aacgagatcacgggcggcgtcaccaacatgcccacctacctcaacaagatctttgtcggt
cgcaaggacggttgggtcgaaatctggaacgtcagcaccggcaaactcatctacaccatc
ctccccccgacccccgactgcggtgccgtcacctgcatgcagcccaccacagccttgtca
cttcttgccattgcctatgcaaacggcaacctggtgatccagaacatcctgactgataag
ccaattatccaactcaaggctggccacgacgatgaacccgtcacttccatctctttccga
tccgacggcatgggagcaggccatgatggccgcaaagacggtgtcatggcaaccgcaacc
gccgccacaggagacgtcacgttctgggacctaaacaatggaggcagggtcatgggtgtt
ctgaggagtgcgcacaaccccccgtcaggcgacggtccgttggtacgaggaggaatcagc
aagatcgagttcctgtcaggccagcctgttgttgtcaccagtggacgggacaacgcgctc
aagacgtggatctttgatgagactcccttctccgccatcccgcgtatcttgcaccagcgc
agcggccacgccgcgcccgtcaagtgcttggaattcctcccctccgactttgatggtgcc
gatgcaggcaacaagtggctcctcagtggtggtcaggatcgtagtctttggggatggagt
atgcgacgcgatggccagagcaccgagctcagccaaggaaacattcgcaggatggcaaag
aagactggtattctttctgcaaaggcgatggccaggggccctacgacgactctggaagac
ctcaaggcccccgagattacctgtatcgccagctctctcaaccgcgacggtggtatcggc
gccttgcccggcaaccagcccatatggcagaagcacagagagaacaagaagaagctcgat
gccgaagtcagtggctcgaccgggtgggagagcgtcgtgacggcacacaaggatgacgct
tgggcgcgtacatggttttggggtcgcaagagagccggtcggtgggcattccccacgggc
gacggttcttttgtctctaccatcgccatcagtccctgcggtacttttgctctagtcggt
tccgtagagggcagcatcgatatgtacaacttgcaatccggcattcaccgccagcgcttc
ccgtccaagctcacccctgcccaagcgagagcgctgaagattcagcagctaaagcaggcc
gacgatgttgtgcagcttcacaccgagaagagcagtggctttgcacccggcacgggaagg
cacacgaaggcagtaacgggtattgtggtggactcgatgaacaagaacgtcatcacgtgc
tccctggatggtaagatcaagttctgggatttcgtcacgggcaacctcgtgcaccagatc
aactgggcgccaatggccgccatcaccgggtgccgctaccacgccgcaaacgacctcatg
gccttcacctgcgacgacaactcggtccgcgtcgtcgacctggaaacgaagaggacaatc
agagagttctggggctgtcagggcaccatcaacgacttttgcttctctaacgacggccgc
tggatcatcgccgcttcacaggactgcgtcgtcagaatatgggacctgcctaccagccac
ctcatcgatgccatccgcctcgagaagccctgcactgcgctggccatgtcctcctcgggc
gagtatctcgccgccacgatcgagaacgagctcggcgtcgccatctggaccaacaaatcc
ctcttcacgcacgtcccgacgcggcaaatctcggacaaggaggccgcgctgctcacggga
cccacgacgtccggcgaaggcaacgagggcctgctggaggcggcctttaccgaggacggc
gacgcggacgcggaggacgagaccgtcgtcgcgccgacggtcgatcagctcagcgccgag
ctgacgacgctgtccctggtccccaagagccgctggcagacgctgctccacctggacctg
atcaagcagcgcaacaagccgaccgaggcccccaaggcccccgagaaggcgcccttcttc
ctgccctctgttggcgccggaaagcagccgcagcagcagtcgctcattgaaggcgccgtg
gcacccgaagccgatgccgcgacggaggcaaagtcccgcattaccaagctcgagcgcggt
cgcatgcaggaagcctttacgagcaagctggacgacggcgcggcctcaggagacttcgac
gagttcatcacccacctcaaatccctctccccctcgacggcagacctcgagctccgctcc
ctctcgcccgaggacggcggcctcctcaacttcatccgcgcgctgacgagccgcctcgcg
gcccgccgcgactacgagctggtccaggcctggatgactgtgtttttgcgcctgcacttt
gacctcgtcatggccgacgcggagctgctggaggcgctgggcgagtggaagacgctacag
gcgcgggaggccgggcggctggacgatcttgttgggtactgtagcggtgttgttgggttc
ttgcggagccctaggacgtaa
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