Colletotrichum fioriniae: CFIO01_06932
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Entry
CFIO01_06932 CDS
T04796
Name
(GenBank) mediator complex subunit Med5
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_06932
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
CFIO01_06932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med5
SSF
Motif
Other DBs
NCBI-ProteinID:
EXF73294
UniProt:
A0A010R6G8
LinkDB
All DBs
AA seq
1035 aa
AA seq
DB search
MDGRVIRGVQRAALEQWTEFIAKSLAHRIDPEKFESYVPFLQAKHPLPPVAVADLFLRPQ
PHNHESLDPRVPRYLQVLSSLNYIDTPSILKALYKYSTSRGHSREAGQLPDAEDQTSNFP
RWESSYAAEEVMFYRLTKSVAQGTAIQNTGTGLEIANVMAKWIALFTDAATAFTVDVMGQ
LHNSQVREEMESARAAFVALLLGVCENQVVLKSLSKPEAQEIRKALSESLANFVPTIMQS
AGPIATRLDMFRTSTLAGFEPVDEQKNKSNAEIEDLFDSTVALENFVVSELPIVNSRAGL
YIYLNAALVGRPLIDDLAIFNYLNNRYQGDVQSTTVDLILVSFDILANAASRNEGHQAAH
LLRSFLMNKLPILIESLSKHMYGPVNAEYCITEALSRVDTTTFPTLSSMFDETRSNNPFT
DSVREDFCWACCLHGLLRESSIETLLGETPYSSLPASGRYVKENLVAECLADPERMQALI
GELDSKEGNAGAVCQALTEVMGQLCRNKETMSLKLLCSQLAQKPLSLDVMLMFEKPATIL
HPLCDLLDNWKYDEDQGEYQPVYEEFGSILLLVMAFAYRYGLSASDMGIISSDSFVARLL
GHGHQSRTLEELSDQEKGHLDGWIHGLFDSEAGGLGDELMSSCPPQDFYLLVSTLFHNIV
LAFSTGHLTEESLRGGIEYLVDTFLLPSLVIAITSLANSLWVERPDCQKAIVRVLNSVLA
PTSISNEAQAMLSSVMNIVAKPLEHSLRAYQRSDPKSQEVEPLLKAIKDSIPLSRRTGAA
DHQELDAWSMGGFSNSIRQTLQQLVQWSIHPTMDRMPPAYTHRQMLVAMKLLGAKRLLQL
LYEDIRQQTETGSGSIIYDVATALVCAPDVVNTPSNPINFIDNSGNVPAPVQRKLTLREV
LKSDAEECKKLQKVDMNLAEIVVRLYRKVETQMAVSQAEVIQADTMLQTDLGLSLDAGAG
SLDDAMAAAAANVAQGDGMSVDNVSLDLGLGGVGGDLGLGGSSNNGGGSLDLGADDLFSG
LGAGDDFQWDNMDLS
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggacggtcgcgtaatacgaggcgtccagcgcgccgcacttgagcaatggaccgaattc
atagccaagagtctggcccaccgcatagatcccgagaagttcgaatcctatgttccgttt
ctccaagcaaagcatccgttaccgccagttgccgtcgccgacctcttcttgcgaccgcaa
cctcacaatcacgagagcctcgacccccgagtcccacgctaccttcaggtgctctccagc
ctgaactatatcgatacgccttcgattctgaaagctttgtacaagtattcgacctctcgt
ggtcactcccgagaagctggacagttgcccgatgccgaagaccaaacatcaaatttcccc
cgatgggagagctcgtatgcggccgaggaggtcatgttctataggcttaccaagtctgtg
gcacaaggaaccgcaatacaaaacacagggacgggtctcgagatcgccaacgtcatggct
aaatggattgcgctcttcaccgatgccgccacagccttcacggtcgatgtcatggggcag
cttcacaacagccaggtgagagaagagatggaatcggcgcgtgccgcattcgtagctttg
cttctcggggtgtgcgaaaaccaggttgtactcaaatctttgagtaaacctgaagcccaa
gaaatcagaaaggcgttgtccgaaagcctcgccaacttcgtcccaaccatcatgcaaagt
gctggccctatcgcgacccgtctggacatgtttcggacaagtacgctagcaggctttgag
ccagtcgacgagcagaagaacaagtctaatgccgagattgaggacttgtttgactctact
gtagcattggagaacttcgtagtgtctgagctacctatagtcaactcgagagctggtctt
tacatatacttgaatgctgcactagttggccggccattgatcgatgatctagccatcttc
aactacttgaataatagataccagggcgatgtacaatcaacaactgttgacctcatcctg
gtctcgttcgacatacttgccaatgccgcctcccgcaatgaggggcatcaagcggcacat
ctcttgcgctcattcctcatgaacaaattaccgattttgattgaaagtctgagcaagcat
atgtacggcccagtgaatgcagaatactgtatcacagaagctcttagccgcgtcgacacg
accacctttcccactctatcatcaatgttcgatgaaaccagaagtaacaaccccttcaca
gactcagttcgggaagacttttgctgggcttgctgtcttcatggcctattgcgggaaagc
agtattgagactcttcttggagaaacaccctattcatcacttccagcaagcggaagatac
gtcaaagagaacctcgtcgcagaatgccttgcagacccggagagaatgcaggctctgatt
ggtgagcttgacagtaaagaaggaaacgccggcgccgtgtgccaagctttgacagaagta
atggggcagctttgcaggaataaggagacaatgtccctgaaactattatgcagtcaattg
gcgcagaagccattgtctcttgatgtcatgctgatgtttgagaaacctgcaacgattctt
caccctttatgcgaccttctggacaactggaagtacgatgaagaccaaggagagtaccaa
cccgtctacgaggagtttggctcaattctgcttctcgtaatggctttcgcatatcgttac
ggtctttcggcatcagacatgggcatcatatcctctgactcttttgtggcaagactactc
ggccacggccaccaaagtcggaccctggaagagttatcagaccaagaaaagggccatttg
gatggatggatccacggcctctttgactcggaagcgggcggactaggcgatgagctcatg
tcgtcctgcccgcctcaagacttctacttactagtatcgactctgttccataacatcgtt
ctagcgttcagtacaggacacttgacggaagagagcctcagaggaggcattgaatatctt
gtcgatacgttccttctgccatctctcgttattgccatcacctctcttgccaactccttg
tgggttgagcgtcctgactgccaaaaggcgattgtcagggtactcaactctgttttggca
ccaacatctatatccaatgaggcgcaagccatgctctcttctgtgatgaacatagttgct
aagccgctagagcattccctcagggcatatcagcgatcagacccaaagagccaagaggtt
gaaccgcttttgaaagcaatcaaagatagtatcccgctttccaggagaacgggtgctgcc
gaccaccaagaactggatgcttggtcgatgggaggattttccaactctatccgacagacg
ctacagcaattggtgcagtggagcatccatccaacaatggacaggatgcctcccgcgtac
acccatcgacagatgctggtggcgatgaaacttcttggtgcaaaacgcttgctacagctc
ctctacgaagacatcagacaacaaacagaaacaggcagcgggagcatcatttacgatgtg
gcaacagcattggtctgcgcgcccgatgtagtgaacacgccgtcgaacccgatcaacttt
attgacaattcgggcaatgtaccggctcctgtccagaggaagcttactctacgagaggtt
cttaagtcagatgccgaggagtgtaaaaagctgcaaaaggtcgacatgaacctggccgag
attgttgtgagattgtaccgcaaggtagagactcagatggccgtgtcccaggccgaggtt
atccaagcagacaccatgctgcagaccgatcttggtctgagcctagacgctggcgcaggt
tcactcgatgatgccatggctgctgcggctgccaatgttgcccaaggcgacggaatgtct
gtggacaacgtcagtctcgacctgggcctaggaggtgttggcggtgatcttggcctcggg
ggctcgtcgaacaacggtggaggatcactggatctcggtgccgatgacctcttcagtggc
ctcggtgctggcgacgattttcaatgggacaacatggacctatcttag
DBGET
integrated database retrieval system