Colletotrichum fioriniae: CFIO01_07010
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Entry
CFIO01_07010 CDS
T04796
Name
(GenBank) WD repeat domain-containing protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CFIO01_07010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfj03009
]
CFIO01_07010
Ribosome biogenesis [BR:
cfj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CFIO01_07010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
Utp13
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
PEP5_VPS11_N
Beta-prop_ACSF4
Beta-prop_Vps41
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_pof12
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
EXF83114
UniProt:
A0A010RXY6
LinkDB
All DBs
AA seq
890 aa
AA seq
DB search
MASKQPLKTTFEPERVIRPIFTGGSVALDNGAKILATPLGEDAILTNPSNGKHLAKIEGD
GETISTLTLTPSGSHLIICSRSLAMKIYALKTTEDGTIETKLTRSLKPHGTPVVVLAVDR
TSTLLATGGTDGAIKVWDIAGGYVTHTFRGPSVLVSALHFFEVAARSNEDASKKGKKATQ
SEETTSTTTNWRLVSGSQDGKVRVWDLHKRAAVASLDSHVSNVQGLDYCPEQQAIVSASR
DKTIIWWDARSWKIRKVVPCLELVEAVGFVDGGRLTYSAGAKGCLRIWDTDTGRELTKDQ
PEKAEAEGVVSAVSHPELPFILCVQVDHTLALYKVPEKDAVEGSVMEPFRRISGTHDSII
DLNYLLPDRSLLALATNAEDIRIVSVKDSSEDATYFGQDIALLKGHDDIIVSLDVDWSGY
WIATGAKDNTARLWRVDPANNSYTCYATFTGHTESVGAVALPKQPPQESSAQFKDPLSHP
PPYLFTGSQDQTVKKWEIPREPQQTRKGGSRAVFTRKAHDKDINAMDVHPQSQLFASSSQ
DKMVKIWSVAEGEVQGILRGHRRGVWSVKFAPAGCPAIQGDEGQVAGKGVVLTGSADKTV
KLWSLNDYSCIRTFEGHSNSVLKVAWLNMPKPEGKGKKQVQFASAGSDGLVKVWDANSGE
AETTLDNHEDRIWALAVHPVDNTVVSGDGDALVTFWKDTTAESQAAATEAAQKLIEQEQE
LQNHIHHGSYREAIVLALQLNHPGRLLSLFTSVVTSTPEPGSLCGLKAVDQVLATLSDEQ
LFTLLLRLRDWNTNARTAAVAQRILWTLVRSYPASKFSNLSVKGARGQRSLKEVLNALRV
YTERHYRRTDELVDESYLVEYTLREMDSLAPPAIEDDVAMEDAAADVIMV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaaacagcccctcaagacaacattcgagcccgaacgggttatacggcccatc
ttcaccggcggctccgtcgcattggacaatggcgccaagattctcgcaacgcccctcggc
gaggatgccatcctcacgaacccctccaacgggaagcatctggcaaagattgaaggagat
ggcgaaacgatctcgacgctgaccctgaccccctccggctcgcacctcatcatctgctcc
cgatccctcgcgatgaagatctacgccctcaagaccaccgaagacggaacgatagagacg
aagctgacccgctcgctgaaacctcacggaacccccgtcgtcgtccttgccgtcgaccga
acgagcaccctcctcgcgaccggaggcaccgacggagcgatcaaggtctgggacattgcc
ggcggatacgtcacgcacaccttccgcggaccgagcgtgctcgtctcggctctgcacttt
tttgaagtggctgcgcggtcaaacgaggacgcaagcaagaaggggaagaaggcgacacag
agcgaggagacaacgtcgacaacaacgaattggcgcctcgtgtctggtagccaggacgga
aaggtacgggtgtgggatcttcacaagcgcgccgccgtcgccagcctcgactcgcacgtc
tccaacgtccagggcctcgactactgccccgaacagcaggccatcgtctcggccagcaga
gacaagacaatcatctggtgggatgcgcggtcgtggaagattagaaaggtcgtgccgtgc
ttggagctcgtcgaggcagttgggttcgtcgatggcggccgcctgacgtattccgccggt
gccaagggctgcctccgaatctgggataccgacacgggccgcgagctcacaaaggaccag
ccggagaaggccgaggcggagggcgtcgtcagtgccgtgtcgcaccccgagctccccttt
atcctctgcgtccaggtcgaccacaccctggcgctgtacaaggtgccggagaaggatgcc
gttgaggggtcagtcatggagccattccgacgaatctctggaacccacgactccatcatc
gatctcaactacctcctgcccgatcgctctctgcttgcgctggccaccaacgccgaggac
attcgcattgtttcggtcaaggactcctcagaagacgcgacgtactttggccaagacatc
gcgctgctcaagggccacgacgacattatcgtgtctttggacgtagactggtcaggctac
tggatcgccaccggcgcaaaggacaacaccgctcgtctctggcgcgtcgatcccgccaac
aactcatacacatgctacgccaccttcaccggccacacggaatcagttggcgccgtggca
ctcccgaagcaacccccgcaagaatcatcagcacagttcaaggaccccctgagccacccc
ccgccatacctcttcaccggatcccaggaccagaccgtcaagaagtgggagattcctcgg
gaaccccaacaaacccgcaagggcggatcccgcgccgtcttcacccgcaaagcccacgac
aaagacatcaacgccatggacgtccacccgcaaagccagctcttcgcctcctcctcccag
gacaaaatggtcaagatttggtccgtcgccgagggcgaggtccagggcatcctccgcggc
cacaggcgcggcgtgtggtccgtcaagtttgcccccgcgggatgccccgccattcagggc
gacgagggccaggttgccggcaagggcgtcgtcctcaccggcagcgccgacaagacggtc
aagctgtggagccttaacgactactcgtgcatccgcacgttcgagggccactccaacagc
gtcctcaaggtcgcctggctcaacatgcccaagcccgagggcaagggcaagaaacaggtc
cagttcgccagcgccggcagcgacggcctcgtcaaagtctgggacgccaactcaggcgag
gccgagacaaccctcgacaaccacgaggaccgcatctgggccctcgccgtccacccggtc
gataacaccgtcgtctcgggcgacggcgacgccctcgtcaccttctggaaggatacaacc
gcggaatcccaggccgccgccaccgaagccgcccagaagctcatcgagcaggagcaggag
ctccaaaaccacatccaccacggctcctaccgcgaagccatcgtcctcgccctccagctc
aaccaccccggccgcctcctcagcctcttcacgtcagtcgtcacctccaccccggaaccc
ggcagcctctgcggcctcaaagccgtcgaccaggtcctcgccacgctctccgacgagcag
ctcttcacgctgctcctccgcctgcgcgactggaacaccaacgcgcggacggccgccgtc
gcgcagcgcatcctctggacgctcgttcgcagctacccggcgtccaagttctccaacctc
tcggtcaagggcgcgcggggccagcgcagcctcaaggaggtgctcaacgcgctccgcgtg
tacaccgagcggcactacaggcggacggacgagctcgtggacgagagttacctggtggaa
tataccctgcgggagatggacagtctcgcgccccccgcgatagaggatgatgtggccatg
gaggatgccgcggcggatgtcataatggtgtga
DBGET
integrated database retrieval system
