Colletotrichum fioriniae: CFIO01_07472
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Entry
CFIO01_07472 CDS
T04796
Name
(GenBank) CC1-like family splicing factor
KO
K13091
RNA-binding protein 23/39
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfj03041
]
CFIO01_07472
Spliceosome [BR:
cfj03041
]
Common components
Common spliceosomal components
General mRNP proteins
CFIO01_07472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_3
Motif
Other DBs
NCBI-ProteinID:
EXF84731
UniProt:
A0A010RVY5
LinkDB
All DBs
AA seq
569 aa
AA seq
DB search
MSGLDVEALLDATAKSSTETKTHDVEERPNGDRSERKERDRGRDGSRDRDYDNRRRDHER
RDRDRRDRSTTRSRRGTPDDIKTSTPRSDAGSHKSRRRSKSRDDDRRRSRRHRGDGDYYR
GGRARSRSRSPHRSYRSSRDDYRERRDRSDRYSGDHRRARDDDRQETSKREATPQLTEDE
RDRRTVFVQQLAARLRTRDLKAFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNEDSVTQ
ALQLTGQKLLGIPIIVQLTEAEKNRQVRNSETTNAHPNSIPFHRLYVGNIHFNVTEQDLQ
AVFEPFGELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKMNGFDLAGRPIRVGLGND
KFTPESTANILQRFPGQNPQFQGSAFSGAGGRGPQTSAFDRAGGRDSEKSGGASALDDTD
VAGVNFNNYSRDALMRKLARTDDASNGVDERQVLKPKTETKPLPVNVNMASRCVVLHNMF
DPEEEEGEEWVKELEDDVRQEAETKYGRVVHISVDPNSKGDIYLKFDKVQGGENAIRGLN
GRYFGGRMIDASPVVDAVYSSLFSRTRAI
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcctagacgtagaggcgttgcttgacgccaccgcaaaaagctctaccgagacg
aagacacacgacgtcgaagaacgccccaatggcgatcgttccgagcgcaaggagcgcgat
cgcggccgcgatggaagccgcgacagggactacgataatcgtcgtcgagaccatgagcgc
cgcgaccgcgaccgtcgcgaccggagcacgacacggagccgacgcggaaccccggacgac
atcaagacatcaacccctcggagcgacgctggtagccacaagagtaggcggagaagcaaa
agccgcgatgatgaccgccgtcgctcacgtcgtcacagaggagatggcgattactacaga
ggcggacgagcccgctcgcgatctcggtcaccccaccgctcttaccgctcatcacgcgat
gactatcgcgaacgccgcgatcgctccgatcgctactctggggaccatcgccgggctagg
gatgacgatcgtcaagaaacttccaagcgtgaggcaacaccacaacttactgaagatgaa
cgcgatcgccgcactgtctttgtccagcagctcgccgcccgtctccgtactcgcgaccta
aaggcattcttcgaaaaggtcggccctgtcaatgaggctcagattgtcaaagatcgcatt
agccaaagatccaagggagttggttatgttgaattcaaaaacgaggattcagtcactcaa
gcgcttcaacttaccggacagaaactgttaggtatccctatcatcgtccagctcacagag
gccgagaagaaccgacaggttcgcaactccgagaccaccaacgcacacccgaactcgatc
cccttccatcgcctctatgtgggcaacattcacttcaacgtcaccgaacaggatttacag
gctgtctttgaacctttcggcgaacttgaatttgtccaactccagaaggacgataatgga
cgcagccgaggctatggattcgtgcaataccgcgaagccagccaagccagggaggccctt
gaaaagatgaacggcttcgatctcgctggtcgcccgattcgcgttggcctcggaaacgat
aagtttacccctgagagcactgccaacatcttgcagagatttcctggccaaaacccacag
ttccaaggctctgcattctctggtgcgggcggccgcggcccccagacgtcggcattcgat
cgtgcaggcggaagagacagcgaaaagtctggcggcgccagcgcccttgacgacacagat
gtcgccggtgtcaactttaacaactacagccgtgatgccctgatgagaaaacttgccagg
actgatgatgcttccaacggagtagatgagcgacaggtgttgaagcccaagaccgagacc
aagcctctgccggtcaacgtgaacatggccagtcgatgcgtcgtcctgcacaacatgttt
gaccctgaagaggaagagggtgaagaatgggtcaaggaattggaggatgacgttcgacag
gaagcagaaaccaagtacggccgcgtcgtacacatctccgtcgatccgaactccaagggc
gacatttatctcaagttcgacaaggttcaaggtggcgagaacgctatcagaggcctcaac
ggtcgttactttggaggcaggatgatcgacgcgtcacctgttgtagatgccgtctacagc
agtttgttctctcgcacacgagcgatctaa
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