Colletotrichum fioriniae: CFIO01_07558
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Entry
CFIO01_07558 CDS
T04796
Name
(GenBank) DNA polymerase family B
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03030
DNA replication
cfj03410
Base excision repair
cfj03420
Nucleotide excision repair
cfj03430
Mismatch repair
cfj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFIO01_07558
03410 Base excision repair
CFIO01_07558
03420 Nucleotide excision repair
CFIO01_07558
03430 Mismatch repair
CFIO01_07558
03440 Homologous recombination
CFIO01_07558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfj03032
]
CFIO01_07558
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_07558
Enzymes [BR:
cfj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFIO01_07558
DNA replication proteins [BR:
cfj03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
CFIO01_07558
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
CFIO01_07558
MMR (mismatch excision repair)
DNA polymerase delta complex
CFIO01_07558
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
RNase_H_2
DUF1948
C1_1
Motif
Other DBs
NCBI-ProteinID:
EXF75235
UniProt:
A0A010QEL6
LinkDB
All DBs
AA seq
1103 aa
AA seq
DB search
MATVLPQKRVLGETPSTRRNIPSTPLSLKKRKVEGFSSSPARHVGSQKNAKNLPGSSQPK
SAFESEVLEKLSQDISELKQNNTEKDQAWERPPLVDFNPARDNLTFQQIEAEEGSLHGGR
ATVKLFGVTEQGHSVMLHVTDFKHYLYVAAPVAFRPEDCNAFKAYLESQVAQHQPCIHSV
AFLMRENIYGFQGNVKSPYLKVTVMDPKFIARVRTTIESGNANWKGLWKGMDGGIMTFDN
IQYVLRFMVDCKIFGMSWVEAPASKYQVLHQSQRQSNCQIEAEINYLDLIAHKPVGEWSK
MAPLRIMSFDIECAGRKGIFPEATHDPVIQIANVVTRYGEKKPFVRNVFCLDTTSPIVAT
QILEFEKEEKMLSEWQKFLIKVDPDIIIGYNIANFDFPYLLDRAKALKVGGFEYWSRIPS
IPSRAKETNFSSKQMGNRDSKATNTNGRLQLDLLQLVQRDHHLRSYTLNSVCSQFLGEQK
EDVHYTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGIPFNFL
LSRGQQVKFISQLFRKALEQKLVIPNMRSEGSDEQYEGATVIEPTRGYYDVPIATLDFAS
LYPSIMQAHNLCYTTLVNKKAIEKFDLKKDDDYIVTPNGDTFVTIKQRKGLLAQILEELL
TARKQAKRELAGETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASSTTAFG
RQMIMKTKEEVEKKYCIANGYTHDAQVIYGDTDSVMVKFGTKDLPEAMKFGEEAASFVSS
KFVKPIKLEFEKVYYPYLLINKKRYAGLYWTNPNKYDKMDTKGIETVRRDNCLLVQTVIE
KVLRMMLIDQDVQGAQDYVKDTIADLLQNKVDMSKLVITKALTKDDYAAKQAHVELAQRM
KKRDAGSAPGLGDRVAYVMIKGAAGAKNYEKSEDPIYVLENNVPIDTRYYLDNQLAKPLG
RIFEPILGETKANSLLTGAHTRTIAVSAPAVGGLMKFAKKTQTCMGCKKPLRGKEESAGA
VCSDCAPRVGELYKKTLDKTSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIFYMRMK
AKKDLEDAGKELKRFDFDQAAIW
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtgctgcctcaaaagcgtgtgcttggggagacaccaagcacccgccgcaac
atcccgtcgacgccattgtccctcaagaaacgcaaagtcgaagggttctcgtcctcaccc
gcccgccatgtcgggtcccagaagaatgcgaagaacctcccgggctctagtcaacccaag
agcgccttcgaatcagaagtcctcgagaagttgagccaggatatctctgaactcaagcag
aacaataccgaaaaggatcaagcatgggagcgacctccgcttgtcgacttcaacccggcc
agggacaacctgaccttccagcaaatcgaggccgaggagggcagtttacatggcggtcga
gcaacagttaagctgtttggtgttaccgagcaaggccactcagtgatgttgcatgtcacg
gacttcaaacactacctctacgtcgctgccccggtggcgtttcgacccgaggactgcaat
gccttcaaggcctatctcgagtcacaagtagcacagcaccagccttgtatccactcagtg
gctttcctgatgagggaaaacatttatggcttccaaggaaatgtcaagagcccctacctc
aaggtcactgtcatggaccctaagttcatcgccagagttcggacaacgatcgagtcgggc
aatgccaactggaagggtctgtggaagggcatggatggtggcatcatgacatttgacaac
attcaatacgtcctccgtttcatggttgactgcaagattttcggaatgtcttgggttgaa
gcccctgcatcaaaataccaggtcttacaccagtctcaacgacaatcgaactgccaaatc
gaagccgagatcaattacctcgacctaatcgctcacaagccggtgggagaatggtccaag
atggctcctctgagaatcatgtcgttcgatatcgagtgcgctggacgtaagggcatcttc
ccagaggcgacacacgaccccgtcatccagattgcgaacgttgtgacaagatacggagag
aagaaacccttcgtgcggaatgtgttctgcttagacacaaccagtcccatcgtcgccacg
cagattctcgagtttgaaaaggaggagaagatgctcagcgagtggcagaagttcctcatc
aaagtcgacccagatatcattatcggatacaacattgccaactttgattttccatacctt
ctcgacagagcgaaagcattgaaggttggaggattcgagtactggtctcgaatccctagc
atcccttccagagccaaggagacgaacttctccagtaagcagatgggtaaccgcgacagc
aaggctaccaacaccaacggacggttgcaactcgacttactgcagcttgttcaacgcgac
caccaccttcgaagttacacgctcaactctgtgtgctcccaatttttgggagagcaaaag
gaggatgtccactacaccatgatcacagagttgttcaacggtacccccgagtcacgccga
cgtctcgccctctactgtctgaaggacgcatacctcccgcagcggctcatggacaagcta
tcttgtcttgaaaactacactgagatggcgagagtcacgggtatcccgttcaactttctg
ctctccagaggacagcaggttaaattcatcagtcagcttttccgaaaagccctcgagcaa
aagctggttattcccaatatgaggtctgagggtagcgatgagcagtatgaaggtgccacg
gtcatcgagccgacccgaggatactacgacgtgcctatcgcaaccctcgattttgcttca
ctgtacccgagtatcatgcaggcccacaacctatgctatacaacgctggtcaacaagaag
gccatcgaaaagtttgatctgaagaaggacgatgactacatcgtcaccccgaacggcgac
acctttgttaccatcaaacaaaggaagggtcttcttgctcagattctcgaggaacttttg
actgcaagaaagcaggccaagcgtgaattagctggagaaacagatcctttcaagaaggca
gtgctgaacggtcgacaactggctttaaagatcagtgcaaactccgtctacggactcacg
ggtgcgacgactggcaagctgccttgtcttgagatcgccagtagcacaacagcctttggt
cgacagatgattatgaagaccaaggaggaggttgagaagaagtactgtattgccaatgga
tacacacatgacgctcaggtcatttatggtgacactgactctgtcatggtcaagtttggc
accaaggaccttcccgaggccatgaagtttggcgaagaagctgctagcttcgtctcctcc
aagttcgtcaagccgatcaagttggagttcgaaaaggtgtactacccatacctgcttatc
aacaagaaacggtacgctggcctatactggacaaatcccaataagtacgacaagatggat
acgaagggtattgagacggttcgacgagacaattgtctgcttgtacaaaccgtcattgag
aaggtgcttcgaatgatgctcatcgatcaagatgtccagggagcgcaagactacgtcaaa
gacacgattgcggacttgttgcaaaacaaggttgatatgtcgaagttggtcattacgaag
gcgctcaccaaagacgattacgcagccaaacaggctcatgttgagctggctcagagaatg
aagaagcgcgatgcaggctcggcaccaggtctaggtgatcgagttgcctacgtgatgatc
aagggtgcggcaggcgcaaagaactacgagaaatccgaggatcccatctacgtccttgag
aacaacgtaccgatcgacacgcgctactacctcgataatcagctcgcgaagcctttgggc
agaatcttcgagcccattctgggtgagaccaaggcgaactcgctgcttacgggagcgcat
acgcgcacgattgcagtgtcggcgccggccgtcggaggtctgatgaagtttgcaaagaag
acgcaaacatgcatgggatgcaagaaaccactccgaggcaaggaggagagcgcgggggca
gtgtgctcggattgcgcgcctcgggtcggcgaattgtataagaagaccctggacaagacg
tcggatctcgaggtgcggttcggccggctctggacgcagtgccagcggtgtcagggcagc
atgcactgcgaagtgatttgtagtagcaaggactgccccatcttctacatgcgtatgaag
gcgaagaaggacttggaggatgcagggaaggagctgaagaggttcgactttgaccaggcg
gccatctggtag
DBGET
integrated database retrieval system
