Colletotrichum fioriniae: CFIO01_07658
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Entry
CFIO01_07658 CDS
T04796
Name
(GenBank) rhamnogalacturonan lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CFIO01_07658
Enzymes [BR:
cfj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CFIO01_07658
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
EXF76401
UniProt:
A0A010R885
LinkDB
All DBs
AA seq
544 aa
AA seq
DB search
MLFVSLLCSLFFLPAVVLAAFGWTDNGSEYVIDSGSDLVIKVTKCCGDISSLNYKGVEYN
GWGGKNTHVESGLGTSTVSITSYSNVIKVSVVHGTLKHWIFVRYGNNNVYLFTNKADDSV
SAMRYIVRIPGGIFSHDSTESDFYDASSTIIEAQDINVNSVGLTKSKHYQGSNYGRVMDF
DYVGRKKTGVGLFMIRSNHEKASGGPFFRSLVRRADPTGEDLYDIYYYNMGHTDPMRTGL
QGPSVLAFTAGEDPNSNLFARKADWSWFDDLGLDGWVPASGRGYASGVGLSNMKSGKTYV
VGLSNSAAQYWGTAGSGGAWSITKIIPGTYTLTVYKDELEVATSSVTIKAGAGTAVNTIT
CVDPQDDAVIWRIGEWDGTPKGFLNFEDTPMKPTYMHPSDTRISTWNAGNFIVGTHSANR
FPGYMWKEVNSGYLIYFKLTTAQLAAGHTVRIGITEGYIGGRPAINVNSWASALPAATNQ
ASTRSLTVGTYRGNNVKLTFAVPQSAWIQSTSEWQILTINIISGSSGEKYLSPGVSFDAL
ELLA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcgtttcgcttctgtgctcgctcttcttcctgccggcggtcgttttggcggcc
tttggctggacggacaatggctccgagtatgtcattgacagcggctctgacctcgtcatc
aaggtgaccaaatgctgcggtgatatatcttcgctcaactacaagggcgtcgagtacaac
ggctggggcggcaagaacacccacgttgaatcaggactcggtaccagcacggtcagcatc
acgagctatagcaacgtcatcaaggtctcggtcgtccacggcactctcaagcactggatc
tttgtccgctacggaaacaacaatgtctacctcttcacgaacaaggcagacgactccgtc
tcggccatgcgctacatcgttcgcatcccaggagggatcttctcccatgactctaccgag
agtgacttctatgatgccagcagcaccatcatcgaggcccaggacatcaatgtcaacagc
gtcggcttgaccaagagcaagcactaccaaggctccaattacggccgagtcatggacttc
gactacgttggccgcaagaagactggcgtcggtctgttcatgatcagaagcaaccacgaa
aaggccagcggcggtcccttcttccgctctctcgtccgtcgtgcggacccgactggtgag
gacttgtacgacatctactactacaacatgggccacaccgaccccatgcgcaccggtctc
caaggcccctccgtcctggcttttaccgccggcgaggaccccaacagcaacctcttcgct
cgcaaggccgactggtcctggttcgatgacctcggcctcgatggctgggtgcccgcctct
ggtcgcggctacgcttccggtgtcggcctctctaacatgaagtccggcaagacatacgtc
gtcgggctgtccaactccgccgcccagtactggggcaccgccggctctggtggcgcctgg
tccatcaccaagatcatccccggcacctacaccctgaccgtctacaaggatgagctcgag
gtcgccacctcctccgtcaccatcaaggctggcgccgggactgccgtcaacaccatcacc
tgtgttgatcctcaggatgacgctgtcatttggcgcatcggcgagtgggatggaaccccc
aagggcttcctgaactttgaggatacccccatgaagcccacttacatgcacccctccgac
acccgcatctccacctggaacgccggcaacttcatcgtcggcacccacagcgccaaccgc
ttccccggttacatgtggaaggaggtcaacagcggctacctcatctacttcaagctcacc
accgcccagctcgcggccggccacaccgtccgcatcggcatcacggagggctacatcggc
ggccgcccggccatcaacgtcaactcgtgggcctcggccctgcccgcggccaccaaccag
gccagcacccgctcgctgaccgtcggcacgtaccgcggcaacaacgtcaagcttaccttc
gccgtgccgcagtccgcctggatccagagcacgagcgagtggcagatcctcaccatcaac
atcatcagcggcagctccggcgagaagtaccttagccccggtgtcagctttgacgccctt
gagcttctggcttaa
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