Colletotrichum fioriniae: CFIO01_08112
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Entry
CFIO01_08112 CDS
T04796
Name
(GenBank) transcription factor TFIID
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CFIO01_08112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfj03000
]
CFIO01_08112
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_08112
Transcription factors [BR:
cfj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
CFIO01_08112
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CFIO01_08112
RNA polymerase III system
TFIIIB
CFIO01_08112
RNA polymerase I system
SL1/TIF-1B
CFIO01_08112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Lpp-LpqN
DUF4295
Motif
Other DBs
NCBI-ProteinID:
EXF80397
UniProt:
A0A010QK76
LinkDB
All DBs
AA seq
256 aa
AA seq
DB search
MEAIQTHPTSAAQAKAFTAPGSLSFPGGAHELPPQANGDKAAVNGQIPVPNGQQPANGTG
VTPATPAATPAAAQGGSGLTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIM
RIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSC
DIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIY
QAFEMIYPVLQDFRKV
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgattcaaactcatcccacgagtgcggcgcaggccaaggctttcaccgcgcct
ggctccctctcgttccccggcggcgcccacgagcttcctcctcaggcgaacggcgataag
gcggccgtcaatggacaaatccctgtgcccaacggccagcagcctgcaaatggtaccggg
gtgacacccgcgacacctgctgcgacgccggccgcggcacagggtggcagtggcttgact
cctacgttgcagaacatcgttgccacggtaaacttggattgccgcctggacctcaagacg
attgccctgcatgcgagaaacgctgagtacaaccccaagcgtttcgctgccgtcatcatg
cgtattcgtgagcccaagaccactgccctgatcttcgcttctggcaagatggtcgtcacc
ggtgccaagtctgaggatgattcgaagcttgcgtcccgcaagtacgcccgtatcatccag
aagcttggcttcaacgccaagttcacggacttcaagatccagaacattgtcggctcttgc
gatatcaagttccccattcgcttggagggtctcgcttcgcgccatcacaacttcagctct
tacgagcctgaactgttccccggtctcatctaccgcatgatcaagcccaagattgtgctt
cttatcttcgtcagcggcaagatcgtcctcaccggtgccaaggtgcgagaggagatctac
caggcattcgagatgatctatcccgtgcttcaggatttccgcaaggtctaa
DBGET
integrated database retrieval system