Colletotrichum fioriniae: CFIO01_08543
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Entry
CFIO01_08543 CDS
T04796
Name
(GenBank) CAF1 family ribonuclease
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFIO01_08543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_08543
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CFIO01_08543
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CFIO01_08543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RFX_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
EXF80366
UniProt:
A0A010RJ30
LinkDB
All DBs
AA seq
546 aa
AA seq
DB search
MPPQLPRFPGGPNTISPYHQQFPSHAQGHGPNHGPPLGGNPSYLNANAAQISPFSTNGNV
LGGTPGLNGGFPLGADTGLGSHAARMGFAHAASLQQQQQHGQPQHNFGLDHGAAPARTTQ
NKGRIREVWKHNLHEEMAVLRELVDKYPYIAMDTEFPGVVSRPMGSFRGKSDYHYQCLRT
NVDMLKVIQIGLTLFNEDGETPPARPNSQQDIELSAAQRRAASQGPFPYAWQFNFKFSVK
DDMYNEKSIESLSSAGIDFASLERDGIDPHEFASLLIPSGLVCFDNVKWISFHGGYDFGY
LTKLLTCNDLPNDESDFDQVMKLYFPSAYDVKHLMKHAIRLHNSGLLTPSDPSSADILQK
FEHKSGLENIADSLKIKRVGNAHQAGSDSLLTGKVFFQMRDKIFNGEIPEEHVGKVWGLG
IPELLVLERLPFGNNGGNQDSAQNNGPNGQHNGGPSTPNTGSVGLASTPAAQAHNTNGIS
MGPMTPGGGGGVFGNFAFGGASTPQLGVGEGREKEQEGKIWCSRWQWKRERPEMGGGVKV
RESTSA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgccgccacagctacctaggttccctggcgggcccaataccatatcgccataccaccag
cagttcccctcccacgcccaaggccacggcccgaatcatgggccccctctaggaggaaac
ccttcctacctcaacgcgaacgccgctcagatcagccccttctctacgaacggaaatgtc
ctcggcggtacccccggcctgaatggcggcttccccctcggcgccgacaccggtctcgga
agccatgctgcacggatgggctttgcgcacgcggccagcctgcagcaacagcagcagcac
gggcagccacaacacaactttgggctcgatcacggcgcggcgccggcgcggacgacgcag
aacaaggggagaataagggaggtgtggaaacacaaccttcacgaggagatggcggtacta
cgggagctcgtcgacaagtacccgtacattgctatggacacggaattcccaggcgtcgtg
tcacggccaatgggctctttcagaggaaagagtgactaccactaccagtgtctgcgcacc
aacgtcgacatgctcaaggtcattcagatcggactgacgctcttcaacgaggatggcgag
acgccgccagcaagaccaaactcgcagcaagacatcgagctaagtgctgctcaacggaga
gcggcgtcgcaagggccgttcccatacgcgtggcagttcaacttcaagttctccgttaag
gacgacatgtataacgagaagtcgatcgagtcattatcgagtgccggaatcgactttgcg
tccctcgagagagacggtatcgatcctcacgaattcgcttccctcctcatcccatccggt
ctcgtttgctttgacaacgtgaagtggatctccttccacggaggctacgactttggctac
cttaccaagttgctgacctgcaacgaccttcccaacgacgaatcggactttgaccaagtc
atgaagctgtatttcccgtcggcttacgacgtcaagcatctgatgaagcacgccatccga
cttcacaactctggactccttacccccagcgatcctagcagcgccgatatcctccagaag
tttgagcacaagtctggcctcgagaatatcgccgattccctcaagatcaagcgcgtggga
aatgcgcaccaggccggctcagactccttgctcacgggcaaggtctttttccagatgcgc
gacaagatctttaacggagagattcctgaagagcatgtgggcaaggtctggggcttgggt
atcccggagctcctggtgttggagagattgccatttggtaacaacggtggcaaccaagat
tcggcgcaaaataacggccctaatggccagcacaacggggggccgagtacgcccaatacc
ggcagtgtcggtctcgcgagcacgcctgccgcgcaagcacacaacaccaatggcatctcc
atgggaccaatgaccccaggcgggggaggcggggtctttggcaactttgcctttgggggc
gccagtacgcctcagttgggagtcggcgagggtcgcgaaaaggagcaagaaggaaagatc
tggtgttctagatggcaatggaagagagagcgtcccgagatgggtggtggtgtcaaagta
agagagagtacgagcgcatga
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