Colletotrichum fioriniae: CFIO01_08897
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Entry
CFIO01_08897 CDS
T04796
Name
(GenBank) RNA recognition domain-containing protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03013
Nucleocytoplasmic transport
cfj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CFIO01_08897
03015 mRNA surveillance pathway
CFIO01_08897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_08897
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CFIO01_08897
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RBD_AKAP-17A
Motif
Other DBs
NCBI-ProteinID:
EXF78638
UniProt:
A0A010S237
LinkDB
All DBs
AA seq
315 aa
AA seq
DB search
MASRTRSLSRDRYRDRSRSLTPLSDRSRSPVRHHTYDSRSPSRSRSPTPRRNGRQRSESR
SRSRGRSASPAIRSTKVVVERLTKNINEAHLEEIFGQFGHIKDLDLPINRTHGTNRGTAY
ILYDTEADAEDAIAHMHEAQLDGAVINVSIVLPRRKMSPAPPAARRGGGSDARGGRGGRA
QGGFHGSGGGGPGPFGQNGPRRGASPPQGRFGPRSDTYRPRSLSRSPSRSPVAAPPSRGG
GGSRYRSRSRSYSRSPSPPPRRGGGSRGNDRNRRRRSPSRDSYDSYDSRRSRSPSRSRDR
GGRGGGGAGGGRGYR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgaacgagatcgctctctcgcgaccgctaccgcgaccgttctcgatcattg
acaccgctctcagaccggtcccgctccccagtccgtcaccatacctacgattcgcgatct
ccgtcgcgttccagatctcccacgccgcgacgaaatggcagacagagaagcgaaagccgc
agccggagccgtggaaggagcgccagtcctgccatcagaagcaccaaggttgttgtcgag
cgattgaccaagaatatcaatgaagcccatttggaggagatctttggccaatttggacac
attaaggatcttgacctgcccattaatagaactcacggcactaaccgcggcacggcttac
attctatacgataccgaggccgatgctgaggatgctattgcccacatgcatgaggcacag
cttgatggcgcggtaatcaacgtttcgattgtgcttccccggcgcaagatgtccccagca
cctcctgccgctcgacgtggcggaggctccgatgccagaggcggccgagggggaagagct
cagggcggattccacggcagtggaggaggcggacccggtcctttcggccagaacggtccc
cgacggggtgcatcaccacctcagggtcgtttcggccccagatcagacacctaccggcct
cgatcgctttcgcgttccccaagccgatctcccgtcgctgctcctccgtccagaggcggg
ggtggaagcagataccgaagccgttcaagatcatactcccggtctccatcaccacccccg
agacgtggaggaggttcccgcggtaacgatcgcaaccgccgaagaaggagcccgagtcga
gacagctacgatagctacgatagccgtcgatcccggtctccgagccgtagtcgtgatcgt
ggcggtcgcggaggcggcggcgccggcggtggccgtggttacagatga
DBGET
integrated database retrieval system
