Colletotrichum fioriniae: CFIO01_08930
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Entry
CFIO01_08930 CDS
T04796
Name
(GenBank) WD domain-containing protein
KO
K10752
histone-binding protein RBBP4
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03082
ATP-dependent chromatin remodeling
cfj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CFIO01_08930
03083 Polycomb repressive complex
CFIO01_08930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_08930
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
CFIO01_08930
Histone modification proteins
HAT complexes
HATB complex
CFIO01_08930
HDAC complexes
Sin3A-HDAC complex
CFIO01_08930
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
CFIO01_08930
PRC2.2
CFIO01_08930
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
CFIO01_08930
Heterochromatin formation proteins
Other heterochromatin formation proteins
CFIO01_08930
Chromatin remodeling factors
NuRD complex
CFIO01_08930
NuRF complex
CFIO01_08930
NuRF complex (fruit fly)
CFIO01_08930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD40_RFWD3
WD_LRWD1
Beta-prop_SPT8
NBCH_WD40
MIOS_WD40
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
DUF1153
Motif
Other DBs
NCBI-ProteinID:
EXF77180
UniProt:
A0A010QKF4
LinkDB
All DBs
AA seq
438 aa
AA seq
DB search
MAPAQVVDDVDVDMIQEEDEDQEQRLINEEYKTWKKNSPFLYDMILSTALEWPTLTTQWF
PDVKEPEDKNYRIHRLLLGTHTSEGLPNHVQIAEVKIPKSVAPNPEDYNEETGEIGGHAK
SSNGQSTAVEFNIVQKIDHPGEINKARYQPQNPDIIATLCVDGKVLVFDRTKHSLQPTGK
VNAQIELIGHKQEGFGLAWNPHEEGCLASGSEDRTVCLWDLKNLQSGSNILKPHRKYTHH
TQIVNDVQYHPIAKSFIGTVSDDLTMQIIDVRQADTTRAAVTAKRGHLDAINALAFNPTS
EVLVATASADKTLGIWDLRNVKEKVHTLEGHNDAVTSLSWHPQEAGILGSGSYDRRVIFW
DLSRVGEEQMPDDQEDGPPELLFMHGGHTNHLADFSWNPNEPWLVCSAAEDNLLQIWKVA
DSIVGRDDGDLPLDEIDR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgcacaagtcgttgacgatgtcgacgtcgacatgatccaagaagaggacgag
gaccaggagcagcgtctcatcaacgaagagtacaagacgtggaagaaaaacagccccttt
ctctacgacatgattctcagcacggctctcgaatggcctacactcactacccaatggttc
cctgacgtcaaggaacccgaagacaagaactaccgaatccacagactgctcctaggaaca
cacacatccgagggcctcccaaaccacgtccagatcgccgaagtcaagatccccaagtct
gtggccccgaaccccgaagactacaacgaggagactggggaaatcggaggtcacgccaag
tcgtcgaatggacaatcgaccgctgtcgagttcaacatcgtgcagaagattgaccacccc
ggcgagattaacaaggcgcgttatcagcctcagaaccccgatatcattgcgactctttgc
gtcgacggcaaggtcctcgtattcgaccgcacaaagcacagcctgcagcccactggcaag
gtcaatgctcagatcgaacttatcggccacaagcaggaaggattcggtctggcctggaac
ccccatgaggaaggctgccttgcgtctggtagtgaagatcgcaccgtctgcctctgggac
ctcaagaacctccaaagcggtagcaacattctgaagcctcatcgcaagtacacacaccac
actcagattgtgaacgatgttcaataccaccccatcgccaagagcttcatcggcacggtc
tctgacgacctgaccatgcaaatcattgacgtgcgacaagccgatacaacccgcgctgcg
gtgacagccaagcgcggccatctggatgccatcaacgccctggcgttcaaccccacatca
gaagtgctcgttgctacggcatcagccgacaagaccctgggcatctgggatcttcgtaat
gtcaaggagaaggtccacacgctggagggacacaatgacgcagtaacttctctctcatgg
caccctcaagaggccggtatcctcggcagtggctcttacgatagaagagtcatcttctgg
gacctttctcgcgtcggagaggagcagatgcccgacgaccaggaggatggacccccggag
cttctcttcatgcatggcggacacaccaaccacctggcagacttcagctggaaccccaac
gaaccctggctcgtttgcagtgccgccgaggacaacctgcttcagatctggaaggtcgcc
gactccattgtcggtagggacgacggcgacttgccgcttgacgagattgaccgatag
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