Colletotrichum fioriniae: CFIO01_08936
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Entry
CFIO01_08936 CDS
T04796
Name
(GenBank) DEAD/DEAH box helicase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_08936
03041 Spliceosome [BR:
cfj03041
]
CFIO01_08936
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_08936
Enzymes [BR:
cfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CFIO01_08936
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CFIO01_08936
mRNA cycle factors
Common to processing body (P body) and stress granule
CFIO01_08936
Spliceosome [BR:
cfj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CFIO01_08936
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CFIO01_08936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
EXF77186
UniProt:
A0A010RAG1
LinkDB
All DBs
AA seq
686 aa
AA seq
DB search
MADQLNMSGLNIQDQQNQPRSYIPPHMRKMGGAAPPAMNGGGGGINNSAWAAGNQQNFNA
AQPGGDWPAMGGPGGPGGPPAAAPAPQQNFHPRGGRGGWQGEGGGRGGYSGGGYGGHAGG
GGGQQARGSGDGQWRDGKHIPGPVNPRVERELFGTPDDPSKQHTGINFEKYDDIPVEASG
HDVPEPVLTFSNPPLDNHLIGNIEMARYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTG
GFLFPILSQAFINGPSAVPPNAAGGFGRQRKAYPTSLILAPTRELVSQIYEESRKFAYRS
WVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRML
DMGFEPQIRRIVEGEDMPNVQNRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSE
NITQKVEYVEDVDKRSVLLDILHTHGAGLTLIFVETKRMADSLSDFLINQSFPATSIHGD
RTQRERERALEFFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGR
AGNTGHSTAFFNRGNRGVVRELLELLKEANQEVPSFLETIARESSYGGGRGGRPRGGGRG
QGANRDFRKYGGGGAGGGGFGGAPGGGFSGGGGGGAYGGGGGGFGGPPAGGFGGGAGGGG
YGGGGGGYGGGGYGNPGGPGGNSSWW
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaactcaacatgtctggcctgaacattcaggatcagcagaaccaaccccgc
tcgtacatcccgcctcacatgcgtaagatgggtggtgcggctcctccggcgatgaacggt
ggcggtggtggtatcaacaacagcgcttgggctgctggcaaccagcagaacttcaacgct
gcccagcctggcggcgactggcctgctatgggcggccctggcggtcccggtggccccccc
gctgctgcccctgctcctcagcaaaacttccacccccgcggtggtcgtggtggctggcaa
ggtgagggcggtggccgcggcggttacagcggtggcggctacggtggtcacgccggcggc
ggtggtggccagcaggctcgcggctccggcgatggtcagtggcgcgacggcaagcacatt
cccggccccgtcaaccctcgtgttgagcgtgagctcttcggtaccccagacgacccgtcc
aagcagcacaccggtatcaacttcgagaagtacgacgacatccccgttgaggcctctgga
cacgacgttcccgagcccgtcctgaccttctcgaaccctcccctcgacaaccacctcatc
ggcaacatcgagatggcccgctacaaggtccccacccctgtccagaagtactcgatcccc
atcgtcatgggcggtcgcgatctcatggcttgtgcccagactggttccggaaagactggt
ggtttcctcttccccattctgtcccaggccttcatcaacggtccttccgccgttcctccc
aacgctgcgggtggcttcggtcgccagcgcaaggcttaccccacctccctgattctggct
cccactcgtgagctggtctcccagatttacgaagagtctcgcaagtttgcgtaccgttct
tgggttcgcccctgcgtcgtctacggtggtgccgacattggctcccagcttcgccagatc
gagcgcggctgcgacttgctcgttgctactccgggacgtcttgtcgatctcatagagcgt
ggtcgcatctccctgcagaacattaagtacctcgtgctcgacgaggctgaccgcatgctt
gacatgggtttcgagccccagattcgccgcattgtcgagggcgaggacatgcccaacgtc
cagaaccgccagactctcatgttctccgccaccttcccccgcgacatccagatgctcgcc
cgcgacttcttgaaggactacgtcttcttgtccgtcggtcgtgtcggttccacctctgag
aacattactcagaaggtcgagtacgtcgaggacgttgacaagcgttctgtgctcttggac
attctccacacccatggtgctggtctcactctcatcttcgtcgagaccaagcgtatggcc
gactctctttcagacttcctgatcaaccagagcttccccgccacctccattcacggtgac
cgcacccagcgtgagcgtgagcgcgctctcgagttcttccgcaacggccgttgccccatt
ttggtcgctactgctgtcgctgctcgtggtctcgatattcccaacgtcacccacgttgtc
aactacgacttgcccaccgacattgacgactacgttcaccgtatcggtcgtactggtcgt
gccggaaacactggtcactccactgccttcttcaaccgtggaaaccgtggtgtcgtccgc
gagcttctcgagcttcttaaggaggctaaccaggaggttcccagcttcctcgagaccatt
gcccgtgagtcgtcctacggtggtggccgtggcggtcgtccccgtggcggcggccgtgga
cagggtgccaaccgcgatttccgcaagtacggcggtggtggtgccggcggcggtggcttc
ggcggtgcccctggcggcggcttcagcggcggtggtggcggtggtgcctacggaggtggt
ggcggcggcttcggcggcccccctgctggcggcttcggcggtggtgctggcggtggcggt
tacggcggtggtggtggtggctacggcggcggtggctacggcaaccccggtggccctggc
ggaaactcctcttggtggtaa
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integrated database retrieval system
