Colletotrichum fioriniae: CFIO01_09163
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Entry
CFIO01_09163 CDS
T04796
Name
(GenBank) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03440
Homologous recombination
cfj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFIO01_09163
03450 Non-homologous end-joining
CFIO01_09163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfj03032
]
CFIO01_09163
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_09163
DNA replication proteins [BR:
cfj03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
CFIO01_09163
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
CFIO01_09163
BRCA1-C complex
CFIO01_09163
NHEJ (non-homologous end-joining)
MRX complex
CFIO01_09163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
SbcC_Walker_B
AAA_15
AAA_29
KxDL
AAA_13
AAA_22
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
EXF82846
UniProt:
A0A010RQW0
LinkDB
All DBs
AA seq
1307 aa
AA seq
DB search
MSKIDKLSIQGIRSFGGSRETISFYTPLTLIVGYNGSGKTTIIECLKYATTGEQPPNSKG
GAFVHDPKLCGEKEVLAQVKLAFTSTSSHKCVATRSLQLTVKKTTRSLKTLEGSLVYNNH
GERTVISSRVAQMDEFIPRELGVSRAILDYVIFCHQDESLWPMSEPSALKKQFDQIFEAM
RYTKAIDNLKVLRKKQGEELAKLKIFEEQDRINKEKGDRAEKRSMALQNDIESSRDKCNA
LTEEMEELQEQIREKHEQANSYLSIVNDLKFKRDQLSYREGSIADIKMTLEELSETDEYL
ENALAQYEERMSLYQEESEHNKAQYSELQRDLTQSRREHSAKLAEQGKHQSDKDKYERQL
QSRMQLVRDAAELHGFRGYDGDLKDSQIKAFNERIQKLLAEKKRDLDRLQKENARELDEA
TKVITELEGRKATTTQNRVFAKQRMGAIEKRINILQMDINRLDIDEGAKAILDSQFEDVE
GRLKKAQESLSSADYDTQLKSENEKLWQLESETEKLGRELIECTRLASERAQLDLRKKEL
ADRKRKLETLATTWKPKLDTHIGPSWQTDTLEAQFHDALKHQNKVVSEARQKRDTARDKQ
QKVDFRLKSAKDIGSRKTDEAQRCRTAVVAALQAVRDGATIEDYEEEVKMHEEDVETYTT
DISLLDALADYYRGCQKTLQDKNKCRLCDRNFDDKSNVSKSRFSDKLIKFLDPNKKEKAE
EDLANSNTLLGSLRKVKTQYETYQRLMSELPPLKEEVASFEAECETLGRQLEEHDAAVST
EEGKLNDIESLNKTVINITQVLKDIKDSEAQVDRIMSQQSSGNVSRSADEIHELQASCNE
QIRTIKGKISKTTTDWQRMRDQVNSLELEKSELRNKLSKALNQLERKKDFMNQIQTLKED
QAHQRELISTADQELESIEPEIAEARSVRDETLQRGRSKEQAVTEERDKVADSFTELKMV
ESDIQEYIDRGGPSNLAANQRAIASLEKSIAGLEKEISDLTVRTNKLKQDIDNGDRKKQN
ISNNLKYRQNLQQLDILRRDIAELESRDADEDYKSLISEAKHLENRHNRLVADRGSIMGQ
MKTKDEELERLLEEWQQEYKNSSRKYRESHIKVETTKAAIEDLGRYISALDTAIMRYHSL
KMEEINRIAGELWQSTYQGTDIDTILIRSDNENATTGRRSYNYRVCMVKQDTEMDMRGRC
SAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDKDNIKSLAESLHAIIKARQAQSN
FQLIVITHDEEFLRHMRCSDFCDSFFRVRRDDKQNSVITKESITRVL
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcgacaagctatccatccagggcatccgctcttttggtggcagcagggag
acgatctccttctacactcccttgaccctcatcgtcggttacaacggctcgggtaagacg
accatcatcgaatgtctcaagtatgcgaccaccggtgagcaacctccaaacagcaaaggc
ggtgccttcgttcatgaccccaagctctgcggagagaaggaagtcctggcccaagtcaag
cttgctttcacatcgactagcagccacaaatgcgttgcgacacgaagccttcagttaacc
gtcaagaaaaccactcgatcactcaagactctcgaaggatccttagtgtacaacaaccat
ggcgagcgcaccgtcatttcatccagggtcgcccagatggacgagttcatcccaagagaa
ttgggcgtttccagagcaatcctcgactacgtcatcttctgccatcaggacgaatctctc
tggcccatgagtgagccttcggccctgaagaaacagttcgaccagatcttcgaagcgatg
cgatacacaaaagccattgacaacctaaaggttctcagaaagaagcagggcgaagagctg
gccaagctcaagatctttgaggaacaagaccgaatcaacaaggagaagggcgaccgtgcc
gaaaagcgatctatggcattgcagaacgatatcgagagctccagggataagtgcaatgcc
ctcacagaggagatggaggagctccaggagcagatccgcgagaaacacgaacaggcaaac
agctacttgagcatcgtcaatgacctcaagttcaagagagatcagctcagctaccgcgaa
ggatccatcgcggatatcaagatgacccttgaagagctttccgagaccgacgaatacctg
gagaatgcgcttgcgcagtatgaagagcgcatgtctctatatcaagaagaatcagaacac
aacaaggcccagtattcggagttgcaaagagatctcacccaatctcgtcgagaacattca
gcgaagctcgccgagcagggaaaacaccaatctgacaaggacaagtatgaacggcaactt
cagtcccgtatgcaattggtccgagatgcagcagaacttcacggtttccgcggctacgat
ggcgacttgaaggacagtcagattaaggctttcaacgagcgcatccagaagttgctggct
gagaagaagcgtgatctcgatcgtctacaaaaggagaacgcgcgtgagctagacgaggcg
accaaggtcattactgagctggagggccgcaaggcaaccacgacgcaaaaccgtgtgttc
gccaagcaacggatgggcgccattgagaagcggattaacatcttacaaatggacattaat
cgcctggatatcgacgagggcgccaaggccattttagacagccaattcgaggatgtcgag
ggcaggttgaagaaggctcaagagtccctgagtagcgccgattacgacactcagctcaaa
tcggagaatgagaagctgtggcagctcgagagcgagacggaaaaacttgggcgcgaatta
attgagtgcaccagacttgcctcggagcgggcacagttggatttgagaaagaaggaacta
gcagatcgcaagcggaaattggagactcttgccactacatggaagcccaagctagacacg
catatcggcccttcgtggcagaccgacactctcgaggcccagttccacgatgctctgaag
caccagaacaaggttgtttctgaagctcgccagaaacgggatactgcgcgggacaagcaa
cagaaggtcgactttagactcaagagcgccaaagacattggttccagaaagaccgatgaa
gcacaacgctgtcgaactgcggttgttgccgctttgcaggcggtccgagacggtgcaaca
attgaggattacgaagaagaagtcaagatgcatgaggaagacgtggagacatacaccact
gatatcagcctccttgatgctttggcggattactaccgcggttgccaaaaaaccctgcaa
gacaagaacaaatgccggctgtgcgaccgcaactttgatgacaagtctaatgtctccaag
tctcgcttctcagacaagttgatcaagtttcttgatcccaacaagaaggagaaggcagag
gaagatctcgccaactctaacacccttcttggctcgctgcggaaggtcaagacgcagtac
gaaacctaccagaggctgatgtcggagctgcctcctctgaaggaagaggttgcttctttc
gaggccgagtgcgaaactttgggcaggcagcttgaggagcatgacgccgctgtcagcacc
gaggaaggcaaattgaacgacatagagtctcttaacaagactgtcatcaacatcacacag
gttttgaaggacatcaaagactctgaagcgcaggttgacagaatcatgtctcagcaatca
tctggcaacgtcagcagaagcgctgatgaaatacacgagcttcaggcttcgtgtaacgaa
cagatccgaacgataaagggcaagatctcaaagacaacgacggattggcagcggatgagg
gaccaggtgaactctctcgagctggagaagagcgagctccggaacaagttgagcaaggcc
ttaaaccagcttgagcgcaagaaggacttcatgaaccagatccagactctaaaggaggac
caggcccaccaacgagagttgatcagcaccgccgaccaggagttagaatccatcgagccg
gagatcgccgaggccagatcggtccgggacgaaaccttgcaacgcggccgtagcaaggaa
caggctgttacagaggagcgcgacaaggtggccgactccttcactgagctcaagatggtt
gaaagtgatatacaggaatacattgaccgtggcggcccttctaacctggcagcaaaccaa
cgtgcaatcgctagtctcgagaagtcaattgctggcctggagaaggagatttcagacttg
acagtgcggacgaacaagttgaagcaggacattgataatggcgatcgcaagaagcagaat
attagcaataacctgaagtatcgccagaacttgcagcagctcgatatcctccgccgagac
attgcagagcttgagtctcgtgatgctgacgaggattacaaatcgctgatttccgaagca
aagcacctggagaaccgccacaaccggcttgtcgccgatcgtggctctatcatgggccag
atgaagacaaaagatgaggaacttgagcgactcctcgaagagtggcagcaggagtacaag
aactcttccagaaagtatcgtgagtcgcacatcaaggttgagacaaccaaagcggccatt
gaggacttgggccggtatatttcggcgctggacacggctatcatgcggtaccacagcctc
aagatggaggagatcaaccgcatcgctggggagttgtggcagagcacgtaccagggtacc
gacattgataccatcctcattcgttccgacaacgagaacgcgacgacgggccgccgctcg
tacaactatcgcgtctgcatggttaagcaggacaccgagatggacatgcgcggtcgctgt
tcagcgggtcaaaaggtcctcgccagcatcattatccgcctcgccctcgccgagagcttc
ggcgtcaactgcggcctcatcgccctcgacgagccgacgaccaacctcgacaaggacaac
atcaagagcctcgccgagagcctccacgccatcatcaaggcgcgccaggcgcagagcaac
ttccagctcatcgtcatcacgcacgacgaggagtttttgcgacacatgcgctgcagcgac
ttctgcgacagcttcttccgggttcggcgggacgacaagcagaacagcgtcattacgaag
gagagcatcaccagagtcctgtaa
DBGET
integrated database retrieval system