Colletotrichum fioriniae: CFIO01_09393
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Entry
CFIO01_09393 CDS
T04796
Name
(GenBank) DNA lyase
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_09393
Enzymes [BR:
cfj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CFIO01_09393
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CFIO01_09393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
zf-GRF
Motif
Other DBs
NCBI-ProteinID:
EXF82663
UniProt:
A0A010SD16
LinkDB
All DBs
AA seq
625 aa
AA seq
DB search
MQETKIQRKDLKDDMVLVPGWDVFFSLPKYKKGYSGVAIYTRNATCCPIRAEEGITGVLP
APNSSISFRDLPEDQQIGGYPRASQLSSEVDEATLDSEGRCVILEFPAFVLIGTYSPATR
DSSRDDFRLGYLGALDARVRNLVAAGKQVILTGDLNVIREEMDTCNLRETLRKEGMTVEE
WMQGPSRRFINQLVVGGQVVGERDEGKESPVLHDLTRIFHPTRQSMFTCWDTKRNTRPAN
NGSRIDYILCSSGIKDWFTDSNIQEGLMGSDHCPVYAVMNDVVTTDGKETPVLDVMNPSG
MFHGGKRLREWSQKDLLPLSAKLIPEFDRRRNIRDMFMKKPAPKPAPSPGSTLLELHSLP
TEDDSDYPVTTQETQDPEASQATTTTEDAPAASQASMQSNAARLPPPKATPSLSQSTSPL
VKRPAESAASAKRAPKKSKTNESDGKAQSTLMGFFKPKNPPQPPPTQSSPAEADAARTNQ
PPSPFSKNKAASGGAAAGPIRSFSGLSEAAGTAEQPGSGGGEDPTPLSSAAKPFETTASE
KVFDPIEVKESWSKFNLGKRVVPKCEHGEPCISFQTKKPGVNCGRSFFICARPLGKSGEK
EKGTEWRCGTFIWSSDWKKSQSQAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagacgaaaatacagcgcaaagacctcaaagatgacatggtactagtgcctggc
tgggacgtattcttcagcctccctaaatacaaaaaaggatattccggtgtcgcgatatac
acccggaacgcaacatgctgccccatccgcgccgaagaaggtatcacaggcgtcctccca
gccccaaactcatccatcagcttccgcgacctaccggaagaccagcagatcggcggctat
ccgcgcgcaagccagctctccagcgaagtagacgaggcaacgctcgattcggagggccgg
tgcgtcatcctcgagtttccggcctttgtgctcatcggaacctacagccccgcgacgcgc
gactcgtctcgtgatgactttcggctgggttacctcggcgccctcgacgcgcgcgtgagg
aatcttgtcgcggctgggaagcaggttatcttgacaggtgacctcaacgtcatccgtgag
gagatggacacttgcaacctcagggagacgctccgcaaggagggcatgactgtcgaagag
tggatgcaggggccaagccggcggttcatcaaccagcttgtcgtcggtggccaggtcgtc
ggtgaacgcgacgaaggaaaggagtcgcccgtcctgcatgacttgacgcgcatcttccac
cccaccaggcagagcatgttcacttgctgggacacaaagaggaatactcgcccggcgaac
aacggcagccggatagactatatcctatgttcgtcgggtatcaaggactggttcacggac
tccaacattcaggaggggctaatgggatctgaccactgccccgtctacgcagtcatgaat
gacgtcgtcacaacagacggcaaggaaacacccgtcctcgacgtgatgaaccccagcggt
atgttccacggcggtaagcggctcagggaatggtcacagaaggacctactccccctatcc
gcaaagctcatccccgaattcgaccgaagacgcaacatccgagacatgttcatgaagaag
cccgccccaaagccagcaccaagcccaggatcgactctcctcgagttacacagtcttcca
accgaagacgacagcgactaccccgtgacgactcaagagacgcaagacccggaagcctcg
caggcaacgacgacgaccgaagatgcgcccgccgcctcacaggcatccatgcagtccaac
gccgcaaggttaccgccccccaaggcgacaccctccttgtcacaaagcaccagcccgctc
gtaaaacgaccagccgaatcggcagcatctgctaaacgagcccccaagaagtcgaaaacc
aacgaatccgacggtaaggcccagagcaccctcatgggcttcttcaagcccaaaaacccg
ccacaaccaccaccaacccagtcttcacccgccgaagcagacgcagcgaggaccaaccag
ccaccatcacccttttccaagaacaaagccgcaagtggtggtgctgctgctggcccaata
cgttctttctcgggactatcagaagcggcgggcacggcagaacaacccggtagtggcggc
ggcgaagaccccacgcctctttcatccgccgcgaagccgttcgagacgacggcctcggaa
aaggtctttgaccccatcgaggtcaaggagtcttggtcaaagttcaacctggggaagagg
gttgtgccaaagtgcgagcacggggagccctgcatcagcttccagaccaagaagccgggc
gttaactgcggcaggtcgttttttatctgcgcccgtcccttgggaaaatctggggaaaag
gaaaaggggacagagtggagatgcggcacttttatatggagcagtgattggaaaaagagc
cagtctcaggcgtcgtag
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