Colletotrichum fioriniae: CFIO01_09424
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Entry
CFIO01_09424 CDS
T04796
Name
(GenBank) MutS domain V
KO
K08737
DNA mismatch repair protein MSH6
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFIO01_09424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_09424
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CFIO01_09424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_23
DUF7311
AAA_27
AAA_21
Motif
Other DBs
NCBI-ProteinID:
EXF77534
UniProt:
A0A010RI48
LinkDB
All DBs
AA seq
1220 aa
AA seq
DB search
MGERSSSAARTPAKTPTLKRQPSSSAGTQKTIVQFFSKSTSVSRSTPTPKPTAKAPDSSP
CLRESKRTNTLPQAPKSSSLTPVPSSDAIEPASSQENLSVSTVKVADDSLPSPSTSAEHM
TPQTTAKLPLPSSSPTRKSRKPVNYAEASDDEDDDPFVRLRTAGTRRRTRTPAAIVDDGD
DYEEDAASNDMPDDDDDMIDFVVSDESDEGSQSKKRKRPAPTKAASRKKSHVSSPVKEEE
FEEVDDEAMLDVPIPSTAQQWRYDPDNVASATTRAVHTQQVRRTLKTKEKAHTREPEDRY
PWLANIVDINKKPRGDPDYDPSSVYIPPGAWNNFSPFEKQYWEIKQKLWDTVVFFKKGKF
YELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQMESALG
KEMRERGDTSAKSKKADKIIRRELACILTGGTLVDGSMLQDDLATYCASIKESTVDGNPA
FGITFVDCATGQFSVTEFEDDTDLTKFETFVAQTSPRELILEKSRISTKALRILKNNTSP
MTIWNYLKSGSEFWDAETTRRELENSNYFAKEDGAEGVWPETLIKSKDKDLLMSALGALV
QYLRVLKLEGDLLSQGSFDWYTPIRRNGTLILDGQTLINLEIFSNTVNGGQDGTLFTLLN
RCVTPFGKRLFRQWVCHPLCDIKRINERLDAVDMLNSDRGMREKFTSQMTRMPDLERLIS
RIHAASCKPEDFVRVLEGFEQIEYTMELLGEVGGGNGLVERLLASMPKLSEPLTYWKTAF
DRKKAKEDKLLIPERGIEEDFDNSQDRIEAIKEELQTLLMGKKSELKCKTLKFTDIGKEV
YQIEAPKAVKVPRDWRQMSATASVKRYYFDELTDLVRELQEAEETHSQIVKEVAARFFHR
FDADYETWSQSIRIISQLDCLISLAKASSSLGEPSCRPEFVDQERSVVEFSELRHPCMLN
AVADFIPNDIELGGDSPNINLLTGANAAGKSTVLRMSCIAVIMAQIGCHVPATSARLTPV
DRIMSRLGANDNIFASQSTFFVELSETKKILAEATPRSLVILDELGRGTSSYDGVAVAQA
VLHHIATHVGCVGFFATHYHSLATEFENHTEIRPRRMQIHVDEEERRVTFLYKLEDGIAE
GSFGMHCAAMCGISSRVIERAEVAAKEWEHTSRLKESLEKAKSGCYIPLGILSDVSSLLK
GGDELEKRGVEVLLKTIEAL
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgggagagagatcctcctcagccgcccgtacgccggccaagacgccaaccctcaagcgc
cagccgtcgtcttcggccggaacccaaaagaccattgttcagttcttctccaaatccacc
agtgtctctcgctcaacaccaaccccgaagcccacggctaaagcccccgactcgtctcct
tgcttgagagagtcgaaacgaacgaacacacttccccaggctccgaaatcgtccagcctg
actcccgtgcccagcagcgatgctattgagcccgcaagctcccaggagaacttgagtgtc
tcgacagtcaaggtagcggatgactccttgccatcaccatctacttcagctgagcatatg
actccacagaccactgccaagctacctttaccgtcttcaagcccaacccgcaagtccaga
aagcctgtcaactacgccgaagcctccgacgatgaggatgacgacccattcgttcgactc
cgaaccgcaggcacacgccgccgtacacggaccccggcagccattgtggatgatggcgat
gactatgaggaggacgctgcaagcaatgacatgcccgatgacgatgatgatatgattgac
ttcgtcgttagtgacgagtcggacgaaggctcgcaatccaagaagcggaaacgccccgca
ccaaccaaggcagcgtcccgaaagaagtctcacgtttcgtctcccgttaaggaagaagag
ttcgaagaagtagacgacgaggccatgttggatgtcccgattccttcgaccgctcagcag
tggcgttacgaccctgacaatgttgcgtctgctactacccgcgccgttcacacccaacaa
gttcgtcgtactctcaagaccaaagagaaggcgcataccagagagccggaggaccggtac
ccctggctcgccaacattgtagatatcaacaaaaagcctcgaggtgaccctgactacgat
ccgtcgtcggtgtacatcccgcccggtgcttggaacaacttctcccctttcgagaagcaa
tactgggagatcaagcagaagctgtgggacaccgtcgttttcttcaagaagggcaagttc
tacgagctttacgaaaacgatgctaccattggtcaccagctctttgatctcaagctgacc
gatcgtgtcaatatgcgcatggtcggtgttccagagagctcgctcgacatgtgggtgaat
cagttcgtcgccaagggctacaaggttgccagagttgatcagatggagtctgcgctcggg
aaagaaatgcgagagagaggcgacacttcggccaagagtaagaaggccgacaagatcatc
cgccgagagctggcttgcatcttgactggtggtactctcgtcgatggaagcatgttgcag
gacgacctggccacatactgcgcctccatcaaggagtccacagtggacggcaaccctgcc
tttggcatcacgttcgttgattgcgcgacgggacaattctccgtcactgaatttgaagat
gataccgatcttaccaagttcgagacgtttgttgctcagacaagcccgagagaactgatt
ctggagaagtctcgaatctcgaccaaagctctccgcatcctcaagaataacacgtccccc
atgactatctggaactacctcaaatccggcagcgaattctgggacgcggagaccactcgc
cgtgaactcgaaaacagcaactacttcgccaaggaagatggcgctgagggagtctggccc
gaaactctgatcaaatccaaggacaaggacttgcttatgtctgccctgggtgctttggtc
cagtacctgagggttctgaaactagagggcgacctcctgtcgcagggcagcttcgattgg
tacactcccatccgccgcaacggaacccttatcctcgacggccagaccttgatcaacctg
gagattttctccaacacagtgaacggtgggcaggatggcaccttgttcacacttctgaac
cgctgcgtcactccattcggcaagcggctgtttcgtcaatgggtgtgccaccccctttgc
gacatcaagcgcattaatgaacgcctggatgccgtagacatgctcaactccgacaggggt
atgcgagagaagtttacgtcccaaatgacgagaatgcccgacctggaacgcctcatctcc
agaatccacgcggcttcctgcaaaccggaggactttgtgcgcgtgctcgaaggcttcgaa
cagatcgagtacaccatggagctgctgggagaggttggtggcggcaatggcttggttgaa
cgcctgctggcttccatgccgaaactcagtgagcctttgacttactggaaaactgcgttt
gatcgaaagaaggcgaaggaagacaaactcctcattcctgaacgtggtatcgaggaagat
tttgacaatagccaagatcgaatcgaagccatcaaggaagagctgcagactctcctcatg
ggcaagaaatctgagctgaagtgcaagacgctcaagttcaccgatattggcaaggaggtc
taccaaatcgaggcacccaaggccgtcaaggtgccgagagactggcgccagatgtccgcg
actgcaagtgtcaaaagatactactttgacgagctcacggacttggttcgggagttacaa
gaggcggaagagactcattcacagatcgtcaaggaggtggccgcccggttcttccatcgc
ttcgatgccgactacgaaacctggtcgcagtcaatcagaatcatctcacaacttgactgc
ctcatcagtctcgccaaggcctcgtcttctctgggcgaacctagctgccgcccggagttc
gtcgaccaggaacgcagtgttgtcgaattttctgagcttcgtcatccatgcatgttgaat
gcagtggccgatttcatccccaacgatattgaactcggcggtgattcaccaaacatcaac
ctattgactggtgccaatgccgcgggcaaatcaaccgttttgagaatgtcctgtattgcc
gttatcatggcccaaattggatgccatgttccggctacatccgctcgactcactcctgtt
gaccgaatcatgtcaagacttggtgctaatgacaacatttttgcctctcagtcaacgttc
ttcgtggagctgtctgagactaagaagattctggcagaggccacgccgcgctctctggta
attctggatgaactcggacgtggtaccagttcctatgacggagttgcagttgcacaggct
gtcttgcaccacattgccacacacgtgggttgtgtcggcttctttgcgacacactaccac
tccctggcgaccgagttcgagaaccataccgagattcgcccacgccgcatgcagattcac
gtggacgaagaggagaggcgcgtcacgttcctctacaagctcgaagacggaattgccgag
ggcagcttcggaatgcactgtgccgccatgtgcggtatctccagccgtgttatcgagcgt
gcagaggttgcagccaaagaatgggagcataccagcaggcttaaggaaagcttggaaaag
gccaagtcaggttgctacatcccgcttggtatactgagcgacgtgtcgtctttgctcaag
ggcggcgatgaactggagaagaggggtgttgaggtgttgctgaaaactattgaggcgctg
tag
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